Click here to switch to the map view.

The map label for this gene is garK [H]

Identifier: 29143222

GI number: 29143222

Start: 2950753

End: 2951895

Strand: Reverse

Name: garK [H]

Synonym: t2868

Alternate gene names: 29143222

Gene position: 2951895-2950753 (Counterclockwise)

Preceding gene: 29143223

Following gene: 29143220

Centisome position: 61.6

GC content: 57.39

Gene sequence:

>1143_bases
ATGAAAATAGTGATCGCACCAGATTCGTATAAGGAAAGTTTGAGTGCTCTTGAGGTAGCGACCGCCATTGAACAAGGATT
TCGCGAGATCTGGCCTGACGCGGATTACCTGAAATTACCGCTGGCTGATGGCGGAGAAGGTACTGTCGAAGCGATGGTTG
AAGCGACGGCGGGTCGAATCGTGCATGTTGAGGTCACCGGGCCGTTGGGGCATCGCGTCAATGCGTTTTATGGGCTTTCC
GGCGATGCGCGTTCCGCGTTCATTGAAATGGCGGCCGCCAGCGGGCTGGAGCAGGTGCCGCCCGCGCAACGCGATCCGTT
GAAGACCACGTCATGGGGAACCGGCGAGCTGATCCGTCATGCGCTGGATGCGGGCGTTGAGCATATCATTATTGGTATCG
GCGGTAGCGCCACCAACGATGGCGGCGCGGGGATGGTACAGGCGCTGGGTGCCAGGCTACGGGATGCGCAGGGCAATGAT
ATTGCGCAAGGCGGCATTGGGCTGGAAACACTCGCCAGCATTGATATCAGCGGCCTGGATAAGCGTTTGTCGGCGTGCCA
TATAGAGGTCGCCTGCGATGTCACGAATCCCCTTACCGGCAAAGAGGGCGCGTCTGCAGTTTTTGGTCCGCAAAAAGGGG
CGACGCCGGAAATGATTGAACGCCTAGATACGGCATTGACTCGCTATGCGCATTTGATTGCCCGCGATCTGCATGTCGAT
GTGTTGGATCTGGCAGGCGGCGGCGCGGCAGGCGGCATGGGGGCGGCGTTATACGCGTTTTGCGGCGCGCAGCTACGGCG
TGGTATTGAGATTGTCACCGATGCGCTTCATCTGGAAGCGTGTCTTGCGGATGCTGATTTAGTCATCACCGGCGAGGGAC
GCATCGACAGTCAGACCATTCACGGTAAAGTCCCTATTGGCGTGGCAAACATCGCCAAACGGTATAACAAGCCGGTAATT
GGTATTGCGGGTAGCCTGACGGCGGACGTTGGCGTGGTTCATGAACATGGGCTTGATGCCGTTTTCAGCGTGATTTATAC
CATCTGCACGTTGGAGGACGCGCTGAAGAATGCGAGTGAAAACGTACGAATGACCGCGCGCAACGTGGCTGCAACGCTGA
AAGCGGGGCAACAATTACGCTGA

Upstream 100 bases:

>100_bases
AGCGCCCTTGCATGGTGCGTTAAGTCAGAGCCGGTTCCGTAAGGAACCGGTCCTTCTCTGGGTGTATGCTTAACAGGATC
AACATGCGTAAGGACGACTT

Downstream 100 bases:

>100_bases
GTTGTAGGCCGGATAAGGCGGTCACGCCGCCATCCGGCGAATATCAGCCTAATATCTTCTTCGCTTCACGCGCGACATTA
TCCATCTCATCCAGCAGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLS
GDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGND
IAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVD
VLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVI
GIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR

Sequences:

>Translated_380_residues
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLS
GDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGND
IAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVD
VLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVI
GIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR
>Mature_380_residues
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRIVHVEVTGPLGHRVNAFYGLS
GDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRHALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGND
IAQGGIGLETLASIDISGLDKRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVD
VLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIGVANIAKRYNKPVI
GIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASENVRMTARNVAATLKAGQQLR

Specific function: Unknown

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI145693185, Length=378, Percent_Identity=68.7830687830688, Blast_Score=479, Evalue=1e-136,
Organism=Escherichia coli, GI1786724, Length=380, Percent_Identity=57.6315789473684, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 39480; Mature: 39480

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCE
VHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRH
EEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHH
ALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLD
HHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHH
KRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVD
HHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
VLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTI
EEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE
HGKVPIGVANIAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASE
CCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
NVRMTARNVAATLKAGQQLR
CHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKIVIAPDSYKESLSALEVATAIEQGFREIWPDADYLKLPLADGGEGTVEAMVEATAGRI
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCE
VHVEVTGPLGHRVNAFYGLSGDARSAFIEMAAASGLEQVPPAQRDPLKTTSWGTGELIRH
EEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHH
ALDAGVEHIIIGIGGSATNDGGAGMVQALGARLRDAQGNDIAQGGIGLETLASIDISGLD
HHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHH
KRLSACHIEVACDVTNPLTGKEGASAVFGPQKGATPEMIERLDTALTRYAHLIARDLHVD
HHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
VLDLAGGGAAGGMGAALYAFCGAQLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTI
EEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEE
HGKVPIGVANIAKRYNKPVIGIAGSLTADVGVVHEHGLDAVFSVIYTICTLEDALKNASE
CCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
NVRMTARNVAATLKAGQQLR
CHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1705543; 9278503 [H]