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The map label for this gene is pad1 [H]

Identifier: 29143177

GI number: 29143177

Start: 2898623

End: 2899216

Strand: Direct

Name: pad1 [H]

Synonym: t2822

Alternate gene names: 29143177

Gene position: 2898623-2899216 (Clockwise)

Preceding gene: 29143175

Following gene: 29143178

Centisome position: 60.49

GC content: 57.91

Gene sequence:

>594_bases
ATGAGATTGATTGTGGGGATGACCGGTGCGACCGGCGCGCCGCTTGGCGTCGAGCTACTCCAGGCATTGCGGGCGATACC
TGATGTTGAAACGCATCTGGTAATGTCAAAGTGGGCGAAAACCACTATTGAACTGGAGACGCCCTACACGCCCGCTGAGG
TAGCCGCCCTGGCAGATTATTGTCATAGCCCGGCCGATCAGGCGGCGACCATTTCCTCCGGCTCATTTCGTACCGACGGC
ATGATTATTATCCCCTGCAGTATGAAAACACTGGCGGGGGTTCGCGCCGGCTATGCCGATGGGCTGGTGGGACGCGCTGC
CGATGTCGTGTTGAAAGAGGGTCGCAAGCTGGTGCTTGTGCCGCGGGAAATGCCGCTCAGCACAATTCATCTGGAAAACA
TGCTTGCGCTTTCTCGTATGGGGGTGGCGATAGTGCCGCCCATGCCCGCGTTCTACAACCTGCCGCAAACCGTTGACGAT
ATTATCCAGCACATCGTGGCGCGCGTTCTCGACCAGTTTGGTCTGGAGCATACGCGCGCGCGCCGCTGGCAAGGACTGCG
ACAGGCAGCAAATTTTTCACAGGAGAATGGATAA

Upstream 100 bases:

>100_bases
AGCTAAACGTGCGCAGGCATCGGGAGCGATCTTGTCGCAAAGGCCGTGTGGGCGTATTTTGATCAAAATGTTCGTATACG
AACGATATTTGAGGTAAGAA

Downstream 100 bases:

>100_bases
TGGCATTTGATGATTTGCGCAGTTTTTTACATGCGCTGGATCAGCAGGGACAACTGCTGAAAATCAGCGAGGAAGTGAAT
GCGGAGCCGGATCTCGCCGC

Product: decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDG
MIIIPCSMKTLAGVRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDD
IIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG

Sequences:

>Translated_197_residues
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDG
MIIIPCSMKTLAGVRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDD
IIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG
>Mature_197_residues
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADYCHSPADQAATISSGSFRTDG
MIIIPCSMKTLAGVRAGYADGLVGRAADVVLKEGRKLVLVPREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDD
IIQHIVARVLDQFGLEHTRARRWQGLRQAANFSQENG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=56.4516129032258, Blast_Score=203, Evalue=6e-54,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=53.475935828877, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21330; Mature: 21330

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADY
CEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHH
CHSPADQAATISSGSFRTDGMIIIPCSMKTLAGVRAGYADGLVGRAADVVLKEGRKLVLV
HCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDDIIQHIVARVLDQFGLEHTRA
CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RRWQGLRQAANFSQENG
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRLIVGMTGATGAPLGVELLQALRAIPDVETHLVMSKWAKTTIELETPYTPAEVAALADY
CEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHH
CHSPADQAATISSGSFRTDGMIIIPCSMKTLAGVRAGYADGLVGRAADVVLKEGRKLVLV
HCCCCCCCEECCCCCCCCCCEEEEECCHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEE
PREMPLSTIHLENMLALSRMGVAIVPPMPAFYNLPQTVDDIIQHIVARVLDQFGLEHTRA
CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHH
RRWQGLRQAANFSQENG
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10986240 [H]