| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is prgH [H]
Identifier: 29143135
GI number: 29143135
Start: 2854213
End: 2855391
Strand: Reverse
Name: prgH [H]
Synonym: t2776
Alternate gene names: 29143135
Gene position: 2855391-2854213 (Counterclockwise)
Preceding gene: 29143139
Following gene: 29143134
Centisome position: 59.59
GC content: 49.45
Gene sequence:
>1179_bases ATGGAAACATCAAAAGAGAAGACGATAACAAGCCCAGGGCCATACATAGTTCGATTACTTAACAGCTCACTGAACGGCTG TGAGTTTCCATTGCTGACAGGCCGAACACTCTTTGTGGTAGGTCAGAGTGATGCGCTCACTGCTTCAGGCCAACTCCCTG ATATACCTGCCGATAGCTTTTTTATCCCGCTGGACCATGGCGGAGTAAATTTTGAAATCCAGGTGGATACGGATGCGACC GAAATTATACTCCATGAGCTGAAAGAAGGAAATCCTGAATCTCGTTCGGTGCAATTAAATACGCCAATACAGGTCGGTGA ATTGCTTATCCTGATTCGCCCGGAAAGCGAGCCGTGGGTGCCCGAGCAGCCTGAGAAGTTAGAAACGTCTGCAAAAAAGA ACGAGCCGCGTTTTAAAAACGGAATTGTAGCAGCACTGGCCGGGTTTTTTATATTGGGAATTGGGACGGTGGGGACGTTA TGGATACTTAACTCGCCGCAGCGGCAGGCCGCAGAGCTCGATTCGTTATTGGGGCAGGAGAAGGAGCGCTTTCAGGTGTT GCCAGGACGGGACAAAATGCTCTATGTCGCTGCGCAAAATGAAAGAGATACGCTGTGGGCTCGTCAGGTTTTAGCGAGGG GCGATTATGATAAAAATGCGCGAGTGATTAACGAAAACGAAGAAAATAAGCGTATCTCTACCTGGCTGGATACCTATTAT CCGCAGCTGGCTTATTATCGGCTTCATTTCGATGAGCCGCGTAAACCCGTTTTCTGGCTAAGCCGCCAGCGAAACACGAT GAGCAAGAAAGAGCTCGAGGTGTTAAGTCAAAAGCTGAGAGCGCTAATGCCTTACGCGGATTCGGTTAACATCACATTGA TGGACGATGTTACCGCCGCAGGCCAGGCGGAAGCGGGGCTAAAACAGCAGGCGTTACCTTATTCCCGCAGGAATCATAAG GGGGGCGTAACGTTTGTTATTCAGGGGGCGCTCGATGATGTAGAAATACTCAGAGCCCGTCAATTTGTCGATAGCTATTA CCGCACATGGGGAGGACGCTATGTGCAGTTTGCGATCGAATTAAAAGATGACTGGCTCAAGGGGCGCTCATTTCAGTACG GGGCGGAAGGTTATATCAAAATGAGCCCAGGCCATTGGTATTTCCCAAGCCCACTTTAA
Upstream 100 bases:
>100_bases ATTTTATTTCTCACTTTTCATTCTATTTTCATCAGGAATCCCTGTGTCCTGTGCGGTAATCTGCTGCTATCGAGAACGAC AGATATCGCTAACAGTATAT
Downstream 100 bases:
>100_bases TTTAACGCAAATAAGGAAGTCATTATGCCAACATCTTGGTCAGGCTATCTGGATGAAGTTTCAGCAAAATTTGATAAGGG CGTTGATAATCTACAAACGC
Product: pathogenicity island 1 effector protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDAT EIILHELKEGNPESRSVQLNTPIQVGELLILIRPESEPWVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTL WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYY PQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHK GGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL
Sequences:
>Translated_392_residues METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDAT EIILHELKEGNPESRSVQLNTPIQVGELLILIRPESEPWVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTL WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYY PQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHK GGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL >Mature_392_residues METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSFFIPLDHGGVNFEIQVDTDAT EIILHELKEGNPESRSVQLNTPIQVGELLILIRPESEPWVPEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTL WILNSPQRQAAELDSLLGQEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYY PQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAAGQAEAGLKQQALPYSRRNHK GGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIELKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL
Specific function: Required for invasion of epithelial cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013387 - InterPro: IPR019029 [H]
Pfam domain/function: PF09480 PrgH [H]
EC number: NA
Molecular weight: Translated: 44458; Mature: 44458
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSF CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCEEECCCCCCCCCCCE FIPLDHGGVNFEIQVDTDATEIILHELKEGNPESRSVQLNTPIQVGELLILIRPESEPWV EEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEECEEEEEEECCCCCCC PEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTLWILNSPQRQAAELDSLLGQE CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCC KERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYY CHHEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHC PQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAA CCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC GQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIE CCHHCCCHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE LKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL EECHHHCCCCEEECCCCEEEECCCCEECCCCC >Mature Secondary Structure METSKEKTITSPGPYIVRLLNSSLNGCEFPLLTGRTLFVVGQSDALTASGQLPDIPADSF CCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCEEECCCCCCCCCCCE FIPLDHGGVNFEIQVDTDATEIILHELKEGNPESRSVQLNTPIQVGELLILIRPESEPWV EEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEECCCEEECEEEEEEECCCCCCC PEQPEKLETSAKKNEPRFKNGIVAALAGFFILGIGTVGTLWILNSPQRQAAELDSLLGQE CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCC KERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISTWLDTYY CHHEEECCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHC PQLAYYRLHFDEPRKPVFWLSRQRNTMSKKELEVLSQKLRALMPYADSVNITLMDDVTAA CCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC GQAEAGLKQQALPYSRRNHKGGVTFVIQGALDDVEILRARQFVDSYYRTWGGRYVQFAIE CCHHCCCHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE LKDDWLKGRSFQYGAEGYIKMSPGHWYFPSPL EECHHHCCCCEEECCCCEEEECCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476203; 11677609 [H]