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The map label for this gene is yadE [H]

Identifier: 29142935

GI number: 29142935

Start: 2633249

End: 2634070

Strand: Reverse

Name: yadE [H]

Synonym: t2556

Alternate gene names: 29142935

Gene position: 2634070-2633249 (Counterclockwise)

Preceding gene: 29142936

Following gene: 29142934

Centisome position: 54.97

GC content: 51.34

Gene sequence:

>822_bases
ATGTCTTATGCACGACATTTACCGGTATTAATGTATCACCATGTCAGTGATAAACCCGGACAGATAACCTTATCTCCCCG
TACGTTCCGGGCGCAGATGAAATGGCTGGCTGAATCTGGCTGGAAAACCGTTACTGCTGCAGCGGTGGAAGCTTTTTATC
ATGGTGCAAGATTGCCTCGTAAAAGCGTCATGCTGACTTTTGATGGCGGCTGGCTGGATAACTGGTTGCAGGTTTTTCCG
GTGCTGCAGGAGTTTAATCTGCATGCGCATCTCTTTCTTGTGACCAGTTTGATCAGTGACGGACCGGTTCGTATTCCTGC
AGGCGAACCGGTGTACTCTCATGATGAGTGTCAGATGCTGGTTAAACAAGGCCGGGTTGATGAGGTCATGCTGCGCTGGT
CAGAGGTCCGGGAGATGCACCTCAGTGGCCTTGTTGAGTTTCATTCGCACACGCACACCCACCGACGCTGGGACCAGAAG
CCTGTGTCCCGTAATCCGTCGGATTTGCTTCGTGTCGATATTCTTCTTAGTCGTAAGCGGATGAGGGAGATGCTGGGTTA
CTGCAGTCAGCATCTGTGCTGGCCTGAGGGCTGGTATTGTTCTGATTATATTCATGTGGCTGAAGAGCTGGGGTTCACAT
ACCTGTATACCACAGAAAGGCGTATGAACAATCCAGTCATCGGTTCACAGCGTATTGGTCGTATCAACACAAAGGAGCGA
AAGAATGTGGGCTGGCTGAAACGTCGCCTGTTTTATCACACCACGCCCGGATTTTCTTCGCTGCTGGCCCGGCATAAGGG
GGCACGTCGGATAGCTGACTGA

Upstream 100 bases:

>100_bases
GGTATTCATATGTGATATTTAAGATTTTATGTTTAGGGGGCTTTTTCTTGTCCCCTCAGGCGTAAAAATAATTTATTTTT
TACATAAAGGAATAAAGCAT

Downstream 100 bases:

>100_bases
GCCGGAGACCAGGATGAAAGTGCTGCATACCGAATCCTCCCCCATCATCGGCGGGCAGGGGTTGTAGGCTATATCCCAAA
TGATGGTGCTGATTTTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKER
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

Sequences:

>Translated_273_residues
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFP
VLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQK
PVSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKER
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD
>Mature_272_residues
SYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPRKSVMLTFDGGWLDNWLQVFPV
LQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQMLVKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKP
VSRNPSDLLRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKERK
NVGWLKRRLFYHTTPGFSSLLARHKGARRIAD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=232, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1787260, Length=246, Percent_Identity=28.4552845528455, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 31922; Mature: 31791

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPR
CCCHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
KSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQML
CEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHH
VKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSRNPSDLLRVDILLSRKR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKER
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCCCCHHH
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SYARHLPVLMYHHVSDKPGQITLSPRTFRAQMKWLAESGWKTVTAAAVEAFYHGARLPR
CCHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
KSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTSLISDGPVRIPAGEPVYSHDECQML
CEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHH
VKQGRVDEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSRNPSDLLRVDILLSRKR
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
MREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTTERRMNNPVIGSQRIGRINTKER
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCCCCCCCHHH
KNVGWLKRRLFYHTTPGFSSLLARHKGARRIAD
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]