Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
---|---|
Accession | NC_004631 |
Length | 4,791,961 |
Click here to switch to the map view.
The map label for this gene is 29142702
Identifier: 29142702
GI number: 29142702
Start: 2372701
End: 2374341
Strand: Direct
Name: 29142702
Synonym: t2304
Alternate gene names: NA
Gene position: 2372701-2374341 (Clockwise)
Preceding gene: 29142701
Following gene: 29142703
Centisome position: 49.51
GC content: 36.44
Gene sequence:
>1641_bases ATGGTTAACAATAGATTAAAAATGGTAATTGCTATCCTTATAGTTTTCTCATTGGTGTATTCAATAGGATTTATTACACC AATGAACTCTGATGACTATACTTATGCCCTAAGAGAGCTTTCGCTTTCTAGCGTAAAAATGCACTATTTGGGATGGAGCG GAAGGGTTGTGTCAGATACGCTCAGCACATCTCTATTAAAGTTTTTCTCCCCGCATATTTACAATGCAATAAACTCAGCA GCGCTAACATTAATGGTGTTGTGCTGGACAATGATCCCAGCGACATTAACAAAGTCGTCACCGTCCCCATATGTGATGAT TTTCTTATTTTTCTTATACTTCATTGCAAATCCAGCTCTCGGTCAAACTAACTTCTGGCTTGTTGGGCTAGCAAATTACT TATGGACCAACATGTTCATTGCCATTTATATACTAATTTCTATATATTTAAGCAATGCCAAAAAATCCAATTTAATACTC TTTGTATATGCCATATCATCGATATTTGCAGGTTGCTCAAATGAAAATACATCTCTTGTAGTTGTATTAATTTCTGTAGC ATATTTTTTTATAATGAATAGAAATAAATATCTACTGATTGGCGTATTCGGATCTGCAATAGGCGCAGGGGTTCTCCTGC TGGCTCCGGGAAACCTATCCCGTGCGTCTACAATACAAGACTGGTACAACCAACCACTTGCATGGAGGGTTCTTGAGCAC TTTTCAGAAAGGCTGCCATCAGCAATGGGGGCATATTGGCAGGTCTATATTGCATTTATAATACTACTAATCTCTGTAGT GTTATCAAGGAATAGTAGCAGCAAACTTATGTTTGGAAGCTTTTTATTCATACTGGGTGCAATTGCTGCAAATGTTGCGT TCCTTGCATCTCCTGCAATGCCCAGCAGGGCTCTCAATGGAGCACTCTGCTTTATGATTCTTTCGATTTCCTTTGTTGCT CATTCTGCATTTACGAAATTTAACAAAGCTTCCATTTATTTATCTATTACTACATATGCAATGGCTTTTTTATATTTCAT TCCATCATACATTCTCTATTACTCATCAATTAAATCAATAAGCAAACAAACGGAGATTAGGGAAGAAATAATAGACAGGG CGAAAGATAACAAACAAGATCAAGCGATAATTCCTGATTATTACTTTCCACCGGTACTGCATGCAGGCCCAAGTCTTGAT ACGTTTAACAGTGAAGCAATGTCTAGATACTACGGGATTGATGTAAAAATAACTGCTCCAGGATTTTTCGACTATTCGCG AGCCTTTAATCTCAAACCTCTTAATATTAACGCAAAAATATGTAACAACGTTTATATAAAATCATTATGGATATATAAAC AGCAAATGGGCATTAAAACCTTTGTAATATTTGAGTTTAATAAGAATCCTGCTGATTCTCTTGATGAGAATACAGCGATG TTCATTAGCTTAAAAACAAAGGATGGAAAAGTTATAAATGCAGATGTCGACAAGAAGACATTTCAAATAGACGGAAGATG GCTTTCAGGACGGGCGATTAACGGCATAGATTCAAATGAATTAGAATCAATTACATCTGGGACATGGGACGTTAGAACAG GGGCGAGGACAAATGAGAATATTACGGAAATAATTAAATAA
Upstream 100 bases:
>100_bases GTTCAATTGATAGGAATAGGTATTCTTGGGGAATATATTGGCAGGATTTACATAGAAACTAAAAAAAGGCCTAAATACAT AATTAAGAATGGGAAGAAAA
Downstream 100 bases:
>100_bases CATTCATGTATAATTAATGTTCCCCGCCACCAATGGGTAACGGGCGGCGGGGATTCCTACATATCGTATGTCACAAATGC CCCATCAGGTTTCTTAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 546; Mature: 546
Protein sequence:
>546_residues MVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTLSTSLLKFFSPHIYNAINSA ALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFIANPALGQTNFWLVGLANYLWTNMFIAIYILISIYLSNAKKSNLIL FVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEH FSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFILGAIAANVAFLASPAMPSRALNGALCFMILSISFVA HSAFTKFNKASIYLSITTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKDNKQDQAIIPDYYFPPVLHAGPSLD TFNSEAMSRYYGIDVKITAPGFFDYSRAFNLKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAM FISLKTKDGKVINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK
Sequences:
>Translated_546_residues MVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTLSTSLLKFFSPHIYNAINSA ALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFIANPALGQTNFWLVGLANYLWTNMFIAIYILISIYLSNAKKSNLIL FVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEH FSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFILGAIAANVAFLASPAMPSRALNGALCFMILSISFVA HSAFTKFNKASIYLSITTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKDNKQDQAIIPDYYFPPVLHAGPSLD TFNSEAMSRYYGIDVKITAPGFFDYSRAFNLKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAM FISLKTKDGKVINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK >Mature_546_residues MVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDTLSTSLLKFFSPHIYNAINSA ALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFIANPALGQTNFWLVGLANYLWTNMFIAIYILISIYLSNAKKSNLIL FVYAISSIFAGCSNENTSLVVVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEH FSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFILGAIAANVAFLASPAMPSRALNGALCFMILSISFVA HSAFTKFNKASIYLSITTYAMAFLYFIPSYILYYSSIKSISKQTEIREEIIDRAKDNKQDQAIIPDYYFPPVLHAGPSLD TFNSEAMSRYYGIDVKITAPGFFDYSRAFNLKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAM FISLKTKDGKVINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNENITEIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61292; Mature: 61292
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHH LSTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFIANPAL HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC GQTNFWLVGLANYLWTNMFIAIYILISIYLSNAKKSNLILFVYAISSIFAGCSNENTSLV CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCHH VVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEH HHHHHHHHHHHCCCCCEEEEEECHHHHHCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHH FSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFILGAIAANVAFLASPAM HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PSRALNGALCFMILSISFVAHSAFTKFNKASIYLSITTYAMAFLYFIPSYILYYSSIKSI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH SKQTEIREEIIDRAKDNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDVKITAP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCEEEEECC GFFDYSRAFNLKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAM CCCCHHHCCCCEEEECCHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEE FISLKTKDGKVINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNEN EEEEECCCCEEEECCCCCEEEEECCEEECCCEECCCCCHHHHHHHCCCCEECCCCCCCCC ITEIIK HHHHCC >Mature Secondary Structure MVNNRLKMVIAILIVFSLVYSIGFITPMNSDDYTYALRELSLSSVKMHYLGWSGRVVSDT CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHHH LSTSLLKFFSPHIYNAINSAALTLMVLCWTMIPATLTKSSPSPYVMIFLFFLYFIANPAL HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC GQTNFWLVGLANYLWTNMFIAIYILISIYLSNAKKSNLILFVYAISSIFAGCSNENTSLV CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCCCCCCHH VVLISVAYFFIMNRNKYLLIGVFGSAIGAGVLLLAPGNLSRASTIQDWYNQPLAWRVLEH HHHHHHHHHHHCCCCCEEEEEECHHHHHCCEEEECCCCCCHHHHHHHHHCCCHHHHHHHH FSERLPSAMGAYWQVYIAFIILLISVVLSRNSSSKLMFGSFLFILGAIAANVAFLASPAM HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC PSRALNGALCFMILSISFVAHSAFTKFNKASIYLSITTYAMAFLYFIPSYILYYSSIKSI CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH SKQTEIREEIIDRAKDNKQDQAIIPDYYFPPVLHAGPSLDTFNSEAMSRYYGIDVKITAP HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHCCEEEEECC GFFDYSRAFNLKPLNINAKICNNVYIKSLWIYKQQMGIKTFVIFEFNKNPADSLDENTAM CCCCHHHCCCCEEEECCHHHHCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEE FISLKTKDGKVINADVDKKTFQIDGRWLSGRAINGIDSNELESITSGTWDVRTGARTNEN EEEEECCCCEEEECCCCCEEEEECCEEECCCEECCCCCHHHHHHHCCCCEECCCCCCCCC ITEIIK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA