| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is fepA [H]
Identifier: 29142682
GI number: 29142682
Start: 2353169
End: 2355424
Strand: Direct
Name: fepA [H]
Synonym: t2283
Alternate gene names: 29142682
Gene position: 2353169-2355424 (Clockwise)
Preceding gene: 29142678
Following gene: 29142683
Centisome position: 49.11
GC content: 54.08
Gene sequence:
>2256_bases ATGAACAAGAAGATTCATTCCCTGACCTTACTGGTCAATTTAGGGATTTACGGGGCCGCTCTGCCCGTGATGGCGGAAGA AAAAACCGATAGCGCTGCGCTCACCAATGAAGACACCATCGTGGTGACCGCTGCCCAGCAAAACCTACAGGCGCCAGGCG TATCCACCATCACCGCCGATGAGATCCGCAAAAATCCGCCCGCGCGCGACGTGTCAGAAATCATCCGCACCATGCCGGGC GTAAACCTGACCGGCAACTCCACCAGCGGTCAGCGCGGGAATAACCGCCAAATCGATATTCGCGGCATGGGGCCGGAAAA CACCCTTATCCTGATAGACGGTAAACCCGTTACCAGCCGTAACTCGGTACGCCTGGGCTGGCGCGGCGAACGCGATACCC GCGGCGATACCGCGTGGGTGCCGCCAGAGATGATCGAACGCATTGAAGTGCTGCGTGGCCCTGCCGCCGCACGTTACGGT AACGGCGCGGCGGGTGGCGTGGTCAATATCATTACCAAAAAAGGCGGTAGCGAGTGGCACGGTTCCTGGAATACCTATTT CAACGCGCCGGAACATAAAGACGAAGGCGCGACCAAACGCACTAACTTTAGCCTGAACGGCCCGCTGGGCGGGGATTTCA GCTTCCGTCTGTATGGCAACCTCGACAAAACGCAGGCGGATGCGCGTAATATTAACCAGGGGCATCAGTCTGAACGTACC GGGAGTTACGCCGACACGTTACCAGCCGGACGCGAGGGGGTCATTAACAAAGATATCAACGGCGTGGTTCGTTGGGATTT TGCTCCGCTTCAGTCTCTGGAGCTGGAGGCCGGTTACAGTCGCCAGGGCAACCTCTATGCCGGCGATACTCAGAACACCA ATACGAACCAACTGGTGAAAGATAATTACGGAAAAGAGACGAACCGCCTCTATCGGCAGAACTACTCTCTGACCTGGAAC GGCGGCTGGGATAATGGCGTAACCACCAGTAACTGGGTGCAATACGAACATACCCGTAACTCCCGGATGCCGGAAGGCCT GGCAGGCGGCACCGAAGGGATTTTCGATCCCAAAGCATCGCAAAAATATGCCGATGCCGATTTGAATGACGTCACCCTAC ACAGCGAAGTGAGCCTTCCTTTCGATCTGCTGGTCAATCAAAACCTGACGCTGGGTACCGAATGGGCCCAACAGCGTATG AAAGACCAGCTCTCCAACTCGCAAACCTTTATGGGGGGAAATATCCCGGGTTACAGCAGTACCAATCGTAGCCCCTATTC AAAAGCGGAAATTTTCTCTCTGTTTGCTGAAAACAACATGGAACTGACCGACAGCACCATGCTGACGCCGGGGATACGTT TCGATCATCACAGTATTGTGGGGGATAACTGGAGCCCGTCGCTGAACCTGTCGCAAGGTCTGGGGGATGACTTTACCCTG AAAATGGGGATCGCCCGCGCTTATAAAGCCCCGAGTCTGTACCAGACTAACCCAAACTATATTTTGTACAGTAAAGGTCA GGGTTGCTACGCGACTGGCGCGGGTACCGGCATCGGCTGCTATATGATGGGTAACGATGATCTGAAAGCCGAAACCAGCA TCAATAAAGAGATCGGTCTGGAATTTAAACGCGATGGCTGGCTGGCCGGCGTCACCTGGTTCCGCAATGATTACCGCAAT AAGATTGAAGCGGGTACGGTGCCGTTGCAGCGTATCAATAACGGCAAAACGGATGTCTATCAGTGGGAGAACGTGCCGAA AGCGGTCGTTGAAGGTCTGGAAGGCACGTTAAACGTACCGGTTAGCGACACCGTCAACTGGACGAATAACGTTACGTATA TGCTGCAGAGTAAAAACAAAGAGACCGGCGAACGCCTGTCGATTATTCCACAGTACACGCTTAACTCTACCCTGAGCTGG CAGGTACGTCAGGACGTTTCTCTGCAATCGACCTTCACCTGGTACGGCAAACAAGAGCCGAAGAAATATGATTATCAGGG TAACCCCGTTACCGGAACAGATAAGCAAGCGGTCAGCCCATACAGTATTGTTGGCCTGAGCGCGACCTGGGACGTGACCA AAAATGTCAGCCTGACCGGTGGCGTGGATAACCTCTTTGACAAACGTCTGTGGCGTGAAGGTAACGCGCAAACCGTCAGG GATACGCAAACTGGCGCTTATATGGCGGGCGCTGGCGCGTACACCTATAACGAACCGGGACGTACGTGGTATATGAGCAT TAATACCCATTTCTGA
Upstream 100 bases:
>100_bases TATTGTAGCGCTATGGGACGCGCGAACACAATTTCACCACCCGGCCAATGCCTTTGACGGGCGCTTTGGCTTATGTGGCT AAAGAAAAGCAGGATATACA
Downstream 100 bases:
>100_bases TGGCAACCTTCCCTCCCTCATTCGGGGAGGGAATTAGCAAAAGACGATGCTGACATCTCATTTTCCCCTTCCCTTTGCCG GACACAGGCTGCATATCGTC
Product: outer membrane receptor FepA
Products: NA
Alternate protein names: Enterobactin outer-membrane receptor [H]
Number of amino acids: Translated: 751; Mature: 751
Protein sequence:
>751_residues MNKKIHSLTLLVNLGIYGAALPVMAEEKTDSAALTNEDTIVVTAAQQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPG VNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRLYRQNYSLTWN GGWDNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKASQKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRM KDQLSNSQTFMGGNIPGYSSTNRSPYSKAEIFSLFAENNMELTDSTMLTPGIRFDHHSIVGDNWSPSLNLSQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRN KIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSW QVRQDVSLQSTFTWYGKQEPKKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF
Sequences:
>Translated_751_residues MNKKIHSLTLLVNLGIYGAALPVMAEEKTDSAALTNEDTIVVTAAQQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPG VNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRLYRQNYSLTWN GGWDNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKASQKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRM KDQLSNSQTFMGGNIPGYSSTNRSPYSKAEIFSLFAENNMELTDSTMLTPGIRFDHHSIVGDNWSPSLNLSQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRN KIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSW QVRQDVSLQSTFTWYGKQEPKKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF >Mature_751_residues MNKKIHSLTLLVNLGIYGAALPVMAEEKTDSAALTNEDTIVVTAAQQNLQAPGVSTITADEIRKNPPARDVSEIIRTMPG VNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYG NGAAGGVVNIITKKGGSEWHGSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVKDNYGKETNRLYRQNYSLTWN GGWDNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKASQKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRM KDQLSNSQTFMGGNIPGYSSTNRSPYSKAEIFSLFAENNMELTDSTMLTPGIRFDHHSIVGDNWSPSLNLSQGLGDDFTL KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRN KIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVPVSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSW QVRQDVSLQSTFTWYGKQEPKKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF
Specific function: This protein is involved in the initial step of iron uptake by binding ferrienterobactin (Fe-ENT), an iron chelatin siderophore that allows E.coli to extract iron from the environment. FepA also acts as a receptor for colicins B and D [H]
COG id: COG4771
COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786798, Length=755, Percent_Identity=81.8543046357616, Blast_Score=1269, Evalue=0.0, Organism=Escherichia coli, GI1788478, Length=768, Percent_Identity=32.1614583333333, Blast_Score=274, Evalue=1e-74, Organism=Escherichia coli, GI1790405, Length=241, Percent_Identity=31.5352697095436, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1787723, Length=168, Percent_Identity=30.3571428571429, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 83013; Mature: 83013
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKIHSLTLLVNLGIYGAALPVMAEEKTDSAALTNEDTIVVTAAQQNLQAPGVSTITAD CCCCEEEEEEEEECCHHHHCCCEEECCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEHH EIRKNPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSR HHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCC NSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGGSEWH CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCCCCCC GSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT CCCCCEECCCCCCCCCCCEECCEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVK CCHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCHHH DNYGKETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKAS CCCCCHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC QKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRMKDQLSNSQTFMGGNIPGYSS CCCCCCCCCCEEEECCCCCCEEHEECCCCEECHHHHHHHHHHHHCCCCEEECCCCCCCCC TNRSPYSKAEIFSLFAENNMELTDSTMLTPGIRFDHHSIVGDNWSPSLNLSQGLGDDFTL CCCCCCHHHHHHHHHHCCCCEECCCEEECCCCEECCCEECCCCCCCCCCHHCCCCCCEEE KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGL EEEHHHHHCCCCEEECCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHCC EFKRDGWLAGVTWFRNDYRNKIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVP EECCCCEEEEHHHHHHHHHCHHCCCCCCHHHCCCCCCCEEECCCCCHHHHHCCCCEEECC VSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSWQVRQDVSLQSTFTWYGKQEP CCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCC KKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEE DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF ECCCCCEEECCCCEEECCCCCEEEEEEECCC >Mature Secondary Structure MNKKIHSLTLLVNLGIYGAALPVMAEEKTDSAALTNEDTIVVTAAQQNLQAPGVSTITAD CCCCEEEEEEEEECCHHHHCCCEEECCCCCCCEECCCCEEEEEECCCCCCCCCCCEEEHH EIRKNPPARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSR HHHCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCC NSVRLGWRGERDTRGDTAWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGGSEWH CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEEEEECCCCCCCC GSWNTYFNAPEHKDEGATKRTNFSLNGPLGGDFSFRLYGNLDKTQADARNINQGHQSERT CCCCCEECCCCCCCCCCCEECCEEECCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCC GSYADTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYSRQGNLYAGDTQNTNTNQLVK CCHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCHHH DNYGKETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHTRNSRMPEGLAGGTEGIFDPKAS CCCCCHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC QKYADADLNDVTLHSEVSLPFDLLVNQNLTLGTEWAQQRMKDQLSNSQTFMGGNIPGYSS CCCCCCCCCCEEEECCCCCCEEHEECCCCEECHHHHHHHHHHHHCCCCEEECCCCCCCCC TNRSPYSKAEIFSLFAENNMELTDSTMLTPGIRFDHHSIVGDNWSPSLNLSQGLGDDFTL CCCCCCHHHHHHHHHHCCCCEECCCEEECCCCEECCCEECCCCCCCCCCHHCCCCCCEEE KMGIARAYKAPSLYQTNPNYILYSKGQGCYATGAGTGIGCYMMGNDDLKAETSINKEIGL EEEHHHHHCCCCEEECCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHCC EFKRDGWLAGVTWFRNDYRNKIEAGTVPLQRINNGKTDVYQWENVPKAVVEGLEGTLNVP EECCCCEEEEHHHHHHHHHCHHCCCCCCHHHCCCCCCCEEECCCCCHHHHHCCCCEEECC VSDTVNWTNNVTYMLQSKNKETGERLSIIPQYTLNSTLSWQVRQDVSLQSTFTWYGKQEP CCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCC KKYDYQGNPVTGTDKQAVSPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWREGNAQTVR CCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCEEE DTQTGAYMAGAGAYTYNEPGRTWYMSINTHF ECCCCCEEECCCCEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3015941; 8905232; 9278503; 2974033; 2526281; 2201687; 9886293 [H]