Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is hutU [H]
Identifier: 29142512
GI number: 29142512
Start: 2159828
End: 2161513
Strand: Reverse
Name: hutU [H]
Synonym: t2097
Alternate gene names: 29142512
Gene position: 2161513-2159828 (Counterclockwise)
Preceding gene: 29142513
Following gene: 29142511
Centisome position: 45.11
GC content: 59.67
Gene sequence:
>1686_bases ATGCCTGAAAGCAAGTATCGTCAGCAGACTATCCGCGCGCCCCGAGGCACGGTATTAACGGCGAAAAGCTGGCTGACAGA AGCCCCGCTGCGGATGTTAATGAATAATCTCGATCCTGACGTGGCGGAAAATCCGCATGAGCTGGTGGTCTACGGCGGGA TTGGTCGCGCCGCGCGCAACTGGGAATGCTATGACGCTATTGTTGATGCGCTCACCCGGCTGGAGGCGGACGAAACGTTG CTGATTCAGTCTGGCAAACCGGTCGGCGTATTTAAAACGCACGACAACGCGCCGCGGGTATTAATCGCCAACTCCAACCT GGTTCCCCACTGGGCGACATGGGAACACTTTAACGAACTGGATGCGAAAGGGCTGGCGATGTACGGTCAAATGACGGCCG GAAGCTGGATCTATATCGGTAGTCAGGGAATCGTGCAGGGAACATACGAAACCTTTGTCGAGGCGGGGCGTCAGCACTAT AACGGCACGCTGGCGGGACGCTGGGCGCTGACCGCCGGGCTGGGCGGCATGGGCGGCGCGCAACCGCTAGCCGCGACGCT GGCCGGAGCGTGTTCGCTGACGATTGAATGCCAGCAAAGCCGTATCGATTTTCGTCTGCGTACTCGCTACGTGGATGAGC AGGCCGCCACGCTGGATGACGCGCTGGCCCGCATTACGCGCTACACCCGCGAGGGGAAAGCCGTGTCCGTCGCCCTGTGC GCGAACGCGGCGGATATCCTGCCGGAACTGGTTAATCGCGGCGTGCGCCCGGACCTGGTGACCGATCAGACCAGCGCCCA CGATCCGCTACATGGCTATTTGCCCTCCGGCTGGTGCTGGGAGGAGTATCAGAAAAACGCGCAATCCGATCCCCGGGGGA CGATGCAGGCAGCGAAACGTTCCATGGCGGCGCATGTTCGGGCGATGCTGGCGTTCAGTAAAATGGGCGTGCCGACCTTT GACTATGGCAACAATATTCGCCAGATGGCGAAAGAGATGGGGGTGGAAAACGCCTTTGATTTTCCGGGATTTGTGCCAGC CTATATTCGTCCGCTGTTCTGTCGTGGCATCGGGCCGTTTCGCTGGGTGGCGCTGTCCGGCGATCCGCAGGATATCTATA AAACCGATGCCAAAGTCAAAGAGATAGTGGCTGAGGATAAACATCTGCATCACTGGCTGGATATGGCGCGTGAGCGCATT CATTTTCAGGGGCTACCGGCGCGTATCTGCTGGGTAGGCTTGGAGTGGCGGCAAAAACTGGGGCTGGCGTTCAACGAAAT GGTGCGTTGCGGCGAGGTATCCGCGCCCATTGTGATTGGCCGCGATCACCTGGATTCCGGTTCTGTCGCCAGCCCTAACC GTGAAACCGAAGCGATGCGCGACGGTTCCGACGCGGTTTCCGACTGGCCGCTGTTAAATGCGTTGCTGAATACCGCCAGC GGGGCGACATGGGTATCGCTCCATCATGGCGGCGGGGTGGGGATGGGTTTTTCGCAACACGCCGGTATGGTGATTGTCTG TGATGGCACTGACGAGGCCGCCGCGCGTATTCGCCGCGTGTTACACAACGATCCGGCGACGGGCGTCATGCGTCATGCCG ATGCCGGATATGATCTCGCGGTGGAATGCGCTGTTGAGCAAGGTCTGAATTTACCGATGGTTGCGGCGACGCAGGGGAAA GGCTGA
Upstream 100 bases:
>100_bases ATATGTCTGATTCTTATCTGTGGGTCTGCGGCGGTGCCTGATAGTGGCGTTTTAGCGTTATTTGGCGATGGCAGACCGAT AATAATGAGGAGTCATTGCT
Downstream 100 bases:
>100_bases TATGAACACCATGACACTCACTCCGGGGCAGTTAAGCCTCTCTCAACTGTACGATGTCTGGCGTCATCCGGTACAGCTTC GGCTGGACGCCAGCGCCATT
Product: urocanate hydratase
Products: NA
Alternate protein names: Urocanase; Imidazolonepropionate hydrolase [H]
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MPESKYRQQTIRAPRGTVLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVDALTRLEADETL LIQSGKPVGVFKTHDNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHY NGTLAGRWALTAGLGGMGGAQPLAATLAGACSLTIECQQSRIDFRLRTRYVDEQAATLDDALARITRYTREGKAVSVALC ANAADILPELVNRGVRPDLVTDQTSAHDPLHGYLPSGWCWEEYQKNAQSDPRGTMQAAKRSMAAHVRAMLAFSKMGVPTF DYGNNIRQMAKEMGVENAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIVAEDKHLHHWLDMARERI HFQGLPARICWVGLEWRQKLGLAFNEMVRCGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTAS GATWVSLHHGGGVGMGFSQHAGMVIVCDGTDEAAARIRRVLHNDPATGVMRHADAGYDLAVECAVEQGLNLPMVAATQGK G
Sequences:
>Translated_561_residues MPESKYRQQTIRAPRGTVLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVDALTRLEADETL LIQSGKPVGVFKTHDNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHY NGTLAGRWALTAGLGGMGGAQPLAATLAGACSLTIECQQSRIDFRLRTRYVDEQAATLDDALARITRYTREGKAVSVALC ANAADILPELVNRGVRPDLVTDQTSAHDPLHGYLPSGWCWEEYQKNAQSDPRGTMQAAKRSMAAHVRAMLAFSKMGVPTF DYGNNIRQMAKEMGVENAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIVAEDKHLHHWLDMARERI HFQGLPARICWVGLEWRQKLGLAFNEMVRCGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTAS GATWVSLHHGGGVGMGFSQHAGMVIVCDGTDEAAARIRRVLHNDPATGVMRHADAGYDLAVECAVEQGLNLPMVAATQGK G >Mature_560_residues PESKYRQQTIRAPRGTVLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARNWECYDAIVDALTRLEADETLL IQSGKPVGVFKTHDNAPRVLIANSNLVPHWATWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYN GTLAGRWALTAGLGGMGGAQPLAATLAGACSLTIECQQSRIDFRLRTRYVDEQAATLDDALARITRYTREGKAVSVALCA NAADILPELVNRGVRPDLVTDQTSAHDPLHGYLPSGWCWEEYQKNAQSDPRGTMQAAKRSMAAHVRAMLAFSKMGVPTFD YGNNIRQMAKEMGVENAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIVAEDKHLHHWLDMARERIH FQGLPARICWVGLEWRQKLGLAFNEMVRCGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASG ATWVSLHHGGGVGMGFSQHAGMVIVCDGTDEAAARIRRVLHNDPATGVMRHADAGYDLAVECAVEQGLNLPMVAATQGKG
Specific function: Unknown
COG id: COG2987
COG function: function code E; Urocanate hydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urocanase family [H]
Homologues:
Organism=Homo sapiens, GI21389467, Length=544, Percent_Identity=34.5588235294118, Blast_Score=303, Evalue=2e-82, Organism=Homo sapiens, GI260306182, Length=308, Percent_Identity=33.7662337662338, Blast_Score=156, Evalue=4e-38, Organism=Caenorhabditis elegans, GI71997891, Length=548, Percent_Identity=34.6715328467153, Blast_Score=314, Evalue=9e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000193 [H]
Pfam domain/function: PF01175 Urocanase [H]
EC number: =4.2.1.49 [H]
Molecular weight: Translated: 61404; Mature: 61273
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS01233 UROCANASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESKYRQQTIRAPRGTVLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARN CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC WECYDAIVDALTRLEADETLLIQSGKPVGVFKTHDNAPRVLIANSNLVPHWATWEHFNEL CHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHC DAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGTLAGRWALTAGLGGMGGA CCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC QPLAATLAGACSLTIECQQSRIDFRLRTRYVDEQAATLDDALARITRYTREGKAVSVALC HHHHHHHHHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC ANAADILPELVNRGVRPDLVTDQTSAHDPLHGYLPSGWCWEEYQKNAQSDPRGTMQAAKR CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH SMAAHVRAMLAFSKMGVPTFDYGNNIRQMAKEMGVENAFDFPGFVPAYIRPLFCRGIGPF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCE RWVALSGDPQDIYKTDAKVKEIVAEDKHLHHWLDMARERIHFQGLPARICWVGLEWRQKL EEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHH GLAFNEMVRCGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTAS CHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCC GATWVSLHHGGGVGMGFSQHAGMVIVCDGTDEAAARIRRVLHNDPATGVMRHADAGYDLA CCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCEE VECAVEQGLNLPMVAATQGKG EEEEHHCCCCCCEEECCCCCC >Mature Secondary Structure PESKYRQQTIRAPRGTVLTAKSWLTEAPLRMLMNNLDPDVAENPHELVVYGGIGRAARN CCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC WECYDAIVDALTRLEADETLLIQSGKPVGVFKTHDNAPRVLIANSNLVPHWATWEHFNEL CHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHC DAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGTLAGRWALTAGLGGMGGA CCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC QPLAATLAGACSLTIECQQSRIDFRLRTRYVDEQAATLDDALARITRYTREGKAVSVALC HHHHHHHHHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC ANAADILPELVNRGVRPDLVTDQTSAHDPLHGYLPSGWCWEEYQKNAQSDPRGTMQAAKR CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH SMAAHVRAMLAFSKMGVPTFDYGNNIRQMAKEMGVENAFDFPGFVPAYIRPLFCRGIGPF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCE RWVALSGDPQDIYKTDAKVKEIVAEDKHLHHWLDMARERIHFQGLPARICWVGLEWRQKL EEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHH GLAFNEMVRCGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTAS CHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCC GATWVSLHHGGGVGMGFSQHAGMVIVCDGTDEAAARIRRVLHNDPATGVMRHADAGYDLA CCEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCCCCEE VECAVEQGLNLPMVAATQGKG EEEEHHCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA