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The map label for this gene is ybiT [H]

Identifier: 29142470

GI number: 29142470

Start: 2109933

End: 2111528

Strand: Reverse

Name: ybiT [H]

Synonym: t2049

Alternate gene names: 29142470

Gene position: 2111528-2109933 (Counterclockwise)

Preceding gene: 29142472

Following gene: 29142468

Centisome position: 44.06

GC content: 52.88

Gene sequence:

>1596_bases
GTGTTAGTTTCCAGCAACGTTACCATGCAGTTCGGCAGTAAGCCGCTGTTCGAAAATATTTCCGTCAAATTTGGCGGCGG
CAACCGTTACGGCCTGATCGGCGCCAACGGTAGCGGAAAGTCCACTTTTATGAAAATCCTCGGCGGCGACCTGGAGCCGA
CGCTGGGCAATGTTTCCCTCGATCCGAATGAGCGCATCGGTAAGCTGCGTCAGGACCAGTTCGCTTTTGAAACATTCACC
GTACTTGATACTGTCATTATGGGGCATGGCGAACTGTGGGAAGTCAAGCAGGAGCGCGACCGTATCTATGCCTTGCCGGA
AATGAGCGAAGAAGACGGCTATAAAGTCGCCGATCTGGAAGTAAAATACGGCGAGATGGACGGTTATTCCGCTGAGGCGC
GTGCGGGCGAACTGCTGTTGGGGGTGGGCATCCCGCTGGAGCAGCATTACGGTCTGATGAGTGAAGTCGCGCCAGGCTGG
AAATTGCGTGTGCTACTGGCGCAGGCGTTATTCTCTAATCCGGACATCCTGTTGCTCGACGAACCGACCAACAACCTGGA
TATTGATACTATCCGTTGGCTGGAGCAGGTGCTGAACGAGCGCGATAGCACGATGATCATCATTTCGCACGACCGTCACT
TCCTGAACATGGTTTGTACGCATATGGCGGATCTGGATTACGGTGACTTGCGCGTCTATCCGGGTAACTATGATGAGTAT
ATGACGGCGGCGACCCAGGCGCGTGAACGTCTGTTGGCCGATAATGCGAAGAAAAAAGCGCAAATTGCCGAGCTGCAATC
TTTTGTTAGCCGTTTTAGCGCCAATGCCTCTAAATCGCGTCAGGCAACGTCGCGCGCGCGGCAGATTGATAAAATCAAGC
TGGAAGAGGTGAAAGCCTCCAGCCGTCAGAACCCGTTCATCCGTTTTGAGCAGGATAAAAAACTGTTCCGTAACGCTCTG
GAAGTGGAGGCGCTGACGAAAGGTTTTGATAACGGTCCGCTGTTTAAAAATGTCAATTTGCTGCTCGAAGTCGGCGAGAA
GCTGGCGGTACTCGGCACCAATGGCGTGGGTAAATCTACGCTGCTGAAGACGCTGGTTGGCGATCTGGACGCCGATCACG
GCACCGTTAAATGGTCGGAAAACGCGCGTATTGGTTACTACGCGCAGGACCACGAATATGAATTCGAAAATGACCTGACG
GTGTTTGAATGGATGAGTCAGTGGAAACAGGAAGGCGACGACGAGCAGGCAGTGCGCAGTATTCTGGGCCGCCTGTTATT
TAGCCAGGATGATATCAAAAAGCCTGCGAAAGTCCTCTCCGGTGGCGAGAAGGGCCGTATGCTGTTCGGCAAACTGATGA
TGCAAAAGCCGAATATCCTGATCATGGACGAACCGACTAACCACCTGGATATGGAGTCGATCGAATCGCTGAATATGGCG
CTGGAGCTGTATCAGGGCACGCTGATCTTTGTTTCGCACGACCGTGAGTTCGTCAGCTCGCTGGCAACCCGCGTCATTGA
AATTACGCCGGAGCGCGTGGTGGACTTCAGCGGTAACTACGACGATTATTTGCGTAGTAAAGGGATTGAAAGCTAA

Upstream 100 bases:

>100_bases
TCCCCTTACGGTTCAGTGTAGCCCTTTGTATAGGGCGCGATCTTATTTCAGACTTGTGGCATAATAAGCGGTTTGTCACA
TCTTTTTTCAGGATAAGCCT

Downstream 100 bases:

>100_bases
ACACTGACGCCCGGTGGCGCTGTGCTTACCGGGCCTACGTATCCTGGCGCGTAGATCTGGTAAGACGGGTGCGCCCAGAC
AAAGGGCACACCGCAGTTGA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFETFT
VLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPLEQHYGLMSEVAPGW
KLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGDLRVYPGNYDEY
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNAL
EVEALTKGFDNGPLFKNVNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLDADHGTVKWSENARIGYYAQDHEYEFENDLT
VFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA
LELYQGTLIFVSHDREFVSSLATRVIEITPERVVDFSGNYDDYLRSKGIES

Sequences:

>Translated_531_residues
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFETFT
VLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPLEQHYGLMSEVAPGW
KLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGDLRVYPGNYDEY
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNAL
EVEALTKGFDNGPLFKNVNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLDADHGTVKWSENARIGYYAQDHEYEFENDLT
VFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA
LELYQGTLIFVSHDREFVSSLATRVIEITPERVVDFSGNYDDYLRSKGIES
>Mature_531_residues
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSLDPNERIGKLRQDQFAFETFT
VLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPLEQHYGLMSEVAPGW
KLRVLLAQALFSNPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGDLRVYPGNYDEY
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNAL
EVEALTKGFDNGPLFKNVNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLDADHGTVKWSENARIGYYAQDHEYEFENDLT
VFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA
LELYQGTLIFVSHDREFVSSLATRVIEITPERVVDFSGNYDDYLRSKGIES

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=526, Percent_Identity=32.319391634981, Blast_Score=259, Evalue=4e-69,
Organism=Homo sapiens, GI27881506, Length=536, Percent_Identity=30.0373134328358, Blast_Score=242, Evalue=5e-64,
Organism=Homo sapiens, GI10947137, Length=536, Percent_Identity=30.0373134328358, Blast_Score=242, Evalue=6e-64,
Organism=Homo sapiens, GI69354671, Length=529, Percent_Identity=30.4347826086957, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI10947135, Length=529, Percent_Identity=30.4347826086957, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI6005701, Length=157, Percent_Identity=29.2993630573248, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=96.9811320754717, Blast_Score=1061, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=529, Percent_Identity=32.3251417769376, Blast_Score=285, Evalue=6e-78,
Organism=Escherichia coli, GI1787182, Length=503, Percent_Identity=33.2007952286282, Blast_Score=242, Evalue=5e-65,
Organism=Escherichia coli, GI2367384, Length=521, Percent_Identity=29.7504798464491, Blast_Score=220, Evalue=2e-58,
Organism=Escherichia coli, GI1786975, Length=519, Percent_Identity=22.7360308285164, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1788165, Length=224, Percent_Identity=29.0178571428571, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1788225, Length=224, Percent_Identity=27.2321428571429, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=27.6859504132231, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=25.3521126760563, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786345, Length=254, Percent_Identity=27.1653543307087, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1786563, Length=216, Percent_Identity=26.8518518518519, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081709, Length=214, Percent_Identity=26.6355140186916, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1789672, Length=208, Percent_Identity=26.9230769230769, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787758, Length=182, Percent_Identity=25.8241758241758, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1786803, Length=220, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=26.0089686098655, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786703, Length=208, Percent_Identity=29.8076923076923, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87082267, Length=208, Percent_Identity=27.8846153846154, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=30.5555555555556, Blast_Score=253, Evalue=1e-67,
Organism=Caenorhabditis elegans, GI17553372, Length=533, Percent_Identity=30.3939962476548, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17559834, Length=539, Percent_Identity=27.4582560296846, Blast_Score=220, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=30.4347826086957, Blast_Score=249, Evalue=8e-67,
Organism=Saccharomyces cerevisiae, GI6321121, Length=533, Percent_Identity=31.1444652908068, Blast_Score=236, Evalue=9e-63,
Organism=Saccharomyces cerevisiae, GI6325030, Length=424, Percent_Identity=27.8301886792453, Blast_Score=130, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6323278, Length=422, Percent_Identity=26.5402843601896, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6324314, Length=421, Percent_Identity=26.1282660332542, Blast_Score=120, Evalue=6e-28,
Organism=Drosophila melanogaster, GI24666836, Length=529, Percent_Identity=32.1361058601134, Blast_Score=261, Evalue=1e-69,
Organism=Drosophila melanogaster, GI24642252, Length=536, Percent_Identity=30.9701492537313, Blast_Score=258, Evalue=5e-69,
Organism=Drosophila melanogaster, GI18859989, Length=536, Percent_Identity=30.9701492537313, Blast_Score=258, Evalue=5e-69,
Organism=Drosophila melanogaster, GI24641342, Length=544, Percent_Identity=30.1470588235294, Blast_Score=233, Evalue=3e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59847; Mature: 59847

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL
CEECCCCEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
DPNERIGKLRQDQFAFETFTVLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEE
VKYGEMDGYSAEARAGELLLGVGIPLEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGDLRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHH
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SRQNPFIRFEQDKKLFRNALEVEALTKGFDNGPLFKNVNLLLEVGEKLAVLGTNGVGKST
CCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHH
LLKTLVGDLDADHGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRS
HHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA
HHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LELYQGTLIFVSHDREFVSSLATRVIEITPERVVDFSGNYDDYLRSKGIES
HHHHCCEEEEEECCHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHCCCCC
>Mature Secondary Structure
MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFMKILGGDLEPTLGNVSL
CEECCCCEEEECCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
DPNERIGKLRQDQFAFETFTVLDTVIMGHGELWEVKQERDRIYALPEMSEEDGYKVADLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEE
VKYGEMDGYSAEARAGELLLGVGIPLEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLD
EEECCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCEEEEE
EPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMVCTHMADLDYGDLRVYPGNYDEY
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEECCCHHHH
MTAATQARERLLADNAKKKAQIAELQSFVSRFSANASKSRQATSRARQIDKIKLEEVKAS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
SRQNPFIRFEQDKKLFRNALEVEALTKGFDNGPLFKNVNLLLEVGEKLAVLGTNGVGKST
CCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHH
LLKTLVGDLDADHGTVKWSENARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRS
HHHHHHHHCCCCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH
ILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMA
HHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
LELYQGTLIFVSHDREFVSSLATRVIEITPERVVDFSGNYDDYLRSKGIES
HHHHCCEEEEEECCHHHHHHHHHHHHHCCHHHHEECCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]