Click here to switch to the map view.

The map label for this gene is 29142318

Identifier: 29142318

GI number: 29142318

Start: 1948414

End: 1948944

Strand: Reverse

Name: 29142318

Synonym: t1892

Alternate gene names: NA

Gene position: 1948944-1948414 (Counterclockwise)

Preceding gene: 29142319

Following gene: 29142317

Centisome position: 40.67

GC content: 54.8

Gene sequence:

>531_bases
GTGCGCAAGAATGATGAGCAGTGGCGGAAACACAGCAAAACCATCAGTCGTGAACTACGCAATCTGGTGAGCAATGCCCC
GCCAGGGCAGGTGATGAAATCCATCGTTGCCGAACAGGTTAAGTACATTAAATCGCTACCCCTCGAGGCTGCTGACAGGG
TATACGACATCCAGAATCGGGCGATTGAAGCTGTTGTGACCGGTGGGAGAGCGGAGCATTTTGCTAAAGAAATTGCAGCA
TCGGGTGATATAGCAAAGTCCAGGGCTGACCTTATCGCCCGTACCGAACTTGGACGTGCAACCGGCGCGCTCGATCAGGC
GCGAGCGCTGTCAATCGGCTCGAATGGTTATATCTGGCGTACAGCCGAAGATGGCGACGTCCGGCATTCTCATCGGGAGA
TGGAAGGGAAGTTTGTCGAATGGGGACGACCCCCAACGCTTGACGGCATGACCGGTCACGCTGGCGAGCTCCCGAACTGC
CGCTGTTATAAAGAAATCGTCTTCCCCAACCCTCATTCTTATCTCGCCTGA

Upstream 100 bases:

>100_bases
AAACGATAGCGTCACCGAAATCATGGAGGCCCTGGAGCGCTACAGCGAAATTATAACGCCGTGGGCGACGAAGGTTGCTG
AGAACTTTACCGCTGACATT

Downstream 100 bases:

>100_bases
ATCGCAGGTAAAACATGAAATATTTTTTCAATACCCGGCTGGGGGAAACCCGCTATCAGCTGGCTGACGGCTCGCTGCTG
TGTAGAGACGTGCCGATAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MRKNDEQWRKHSKTISRELRNLVSNAPPGQVMKSIVAEQVKYIKSLPLEAADRVYDIQNRAIEAVVTGGRAEHFAKEIAA
SGDIAKSRADLIARTELGRATGALDQARALSIGSNGYIWRTAEDGDVRHSHREMEGKFVEWGRPPTLDGMTGHAGELPNC
RCYKEIVFPNPHSYLA

Sequences:

>Translated_176_residues
MRKNDEQWRKHSKTISRELRNLVSNAPPGQVMKSIVAEQVKYIKSLPLEAADRVYDIQNRAIEAVVTGGRAEHFAKEIAA
SGDIAKSRADLIARTELGRATGALDQARALSIGSNGYIWRTAEDGDVRHSHREMEGKFVEWGRPPTLDGMTGHAGELPNC
RCYKEIVFPNPHSYLA
>Mature_176_residues
MRKNDEQWRKHSKTISRELRNLVSNAPPGQVMKSIVAEQVKYIKSLPLEAADRVYDIQNRAIEAVVTGGRAEHFAKEIAA
SGDIAKSRADLIARTELGRATGALDQARALSIGSNGYIWRTAEDGDVRHSHREMEGKFVEWGRPPTLDGMTGHAGELPNC
RCYKEIVFPNPHSYLA

Specific function: Unknown

COG id: COG2369

COG function: function code S; Uncharacterized protein, homolog of phage Mu protein gp30

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To E.coli plasmid IncP-alpha RP4 protein traN [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006528 [H]

Pfam domain/function: PF04233 Phage_Mu_F [H]

EC number: NA

Molecular weight: Translated: 19595; Mature: 19595

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNDEQWRKHSKTISRELRNLVSNAPPGQVMKSIVAEQVKYIKSLPLEAADRVYDIQNR
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AIEAVVTGGRAEHFAKEIAASGDIAKSRADLIARTELGRATGALDQARALSIGSNGYIWR
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEE
TAEDGDVRHSHREMEGKFVEWGRPPTLDGMTGHAGELPNCRCYKEIVFPNPHSYLA
ECCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRKNDEQWRKHSKTISRELRNLVSNAPPGQVMKSIVAEQVKYIKSLPLEAADRVYDIQNR
CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AIEAVVTGGRAEHFAKEIAASGDIAKSRADLIARTELGRATGALDQARALSIGSNGYIWR
HHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEE
TAEDGDVRHSHREMEGKFVEWGRPPTLDGMTGHAGELPNCRCYKEIVFPNPHSYLA
ECCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]