| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142317
Identifier: 29142317
GI number: 29142317
Start: 1947167
End: 1948399
Strand: Reverse
Name: 29142317
Synonym: t1891
Alternate gene names: NA
Gene position: 1948399-1947167 (Counterclockwise)
Preceding gene: 29142318
Following gene: 29142316
Centisome position: 40.66
GC content: 54.18
Gene sequence:
>1233_bases ATGAAATATTTTTTCAATACCCGGCTGGGGGAAACCCGCTATCAGCTGGCTGACGGCTCGCTGCTGTGTAGAGACGTGCC GATAGGTCGAACGGGTAAGCAGCTTTACGGCGCTGCTGATCTGCCAAACCTCAAGCCTGACAAGTTCGGTGAGATAGTCG TAACGCGCTCTCCTGAGCAGGTATTCCATCCGGCCACGCTTGCCTCCTTCGAAGGGATGAGCATCACGATCCTGCATCCG GAGGATGAAAACGGGAACGTCCGGTTGGTCAATCCCGAGAACTGGAAAGAGCTTGCGGTCGGTCATCTTCAGAATGTCCG GCGCGGGACTGGTGAGCAGTCTGATTTGATGCTGGCTGACCTTATCGTCAAAGACGAAAGCGCCATTCAGCTTATCGAAG ATGGTCTGCGCGAAGTGTCGTGTGGCTATGACGCGGAATATGAACAGGCTGAGCCGGGTAAGGCTGAGCAGGTCGATATT ACCGGAAACCATGTGGCTCTTGTCCCCAAAGGCAGAGCCGGAAATCGTTGTGCAATTGGAGACAGAGACACAATGGCAAA TCAAAAGAAAAGCTGGTGGACCCGCATGCGCACGGCCATCAAAACAGGTGACTCGGACACCATGAACGAACTGCTGGACT CAGCGCCAGCGGCTGTAACGGGGGATGAAGGTGATCTGCCGGGCGGCGTCAATCTCAACATTAACCTTTCACCACAACAA CCATTGCCGGACAAAAAGCCGGAGATGGGCGGAGATGTGACCGGCGACGGCGAGGACGATATCAAAACCCTGCTCAAGGC CCTGCTGGCTAAGCTGGAAGGAACGGCAACAGGCGATAATGCTGACACCCCTGATGATAAAGATAAGAAAGACCCGACCG GCGACGGCGAGGACAACGAAGAGGAAACCACGATTACGGGTGACTCTGCCTATCGCGCTGAAGTCATTATCCCGGGTATC GATCTGAGCCGTAAGGTGAAACCGACCGCATTTAAACGTGATGTGCTGGCGGCCGCAGACAAAACACTGGTTCGCCAGGT TGTCGGTGACGCTGATATCCGCAAATTACCTAAACAATCGGTTGATATGGCGTTTAACGCCGTATCTGAGATTGCAAAAG GGAGAAACACCCGCAGCACCACGGGCGATGCACAACGTCCAGGCATGGGCATGACCAGCATCGCTTCCCTGAACAAACAA AACGCCGACTTCTGGTCTAACCGCAAAGGATAA
Upstream 100 bases:
>100_bases GCATGACCGGTCACGCTGGCGAGCTCCCGAACTGCCGCTGTTATAAAGAAATCGTCTTCCCCAACCCTCATTCTTATCTC GCCTGAATCGCAGGTAAAAC
Downstream 100 bases:
>100_bases TCCAATGACTGCATATCTGTACCGGATGCCTGTTGGCATTGCCGGGGCTATCTCTCGCCCGCAGGACTTAACCGTCGAAC CGGTGATCCTTAAATCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 410
Protein sequence:
>410_residues MKYFFNTRLGETRYQLADGSLLCRDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHP EDENGNVRLVNPENWKELAVGHLQNVRRGTGEQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQAEPGKAEQVDI TGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQ PLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNEEETTITGDSAYRAEVIIPGI DLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQSVDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQ NADFWSNRKG
Sequences:
>Translated_410_residues MKYFFNTRLGETRYQLADGSLLCRDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHP EDENGNVRLVNPENWKELAVGHLQNVRRGTGEQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQAEPGKAEQVDI TGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQ PLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNEEETTITGDSAYRAEVIIPGI DLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQSVDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQ NADFWSNRKG >Mature_410_residues MKYFFNTRLGETRYQLADGSLLCRDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQVFHPATLASFEGMSITILHP EDENGNVRLVNPENWKELAVGHLQNVRRGTGEQSDLMLADLIVKDESAIQLIEDGLREVSCGYDAEYEQAEPGKAEQVDI TGNHVALVPKGRAGNRCAIGDRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQ PLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNEEETTITGDSAYRAEVIIPGI DLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQSVDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQ NADFWSNRKG
Specific function: Unknown
COG id: COG3566
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019246 - InterPro: IPR016913 [H]
Pfam domain/function: PF09979 DUF2213 [H]
EC number: NA
Molecular weight: Translated: 44465; Mature: 44465
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFFNTRLGETRYQLADGSLLCRDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQ CCEEECCCCCCCEEEECCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCHHH VFHPATLASFEGMSITILHPEDENGNVRLVNPENWKELAVGHLQNVRRGTGEQSDLMLAD HHCCHHHHCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEH LIVKDESAIQLIEDGLREVSCGYDAEYEQAEPGKAEQVDITGNHVALVPKGRAGNRCAIG HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEECCC DRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQ CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCC PLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EETTITGDSAYRAEVIIPGIDLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQS CCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHH VDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQNADFWSNRKG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKYFFNTRLGETRYQLADGSLLCRDVPIGRTGKQLYGAADLPNLKPDKFGEIVVTRSPEQ CCEEECCCCCCCEEEECCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCHHH VFHPATLASFEGMSITILHPEDENGNVRLVNPENWKELAVGHLQNVRRGTGEQSDLMLAD HHCCHHHHCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEH LIVKDESAIQLIEDGLREVSCGYDAEYEQAEPGKAEQVDITGNHVALVPKGRAGNRCAIG HHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEECCC DRDTMANQKKSWWTRMRTAIKTGDSDTMNELLDSAPAAVTGDEGDLPGGVNLNINLSPQQ CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCC PLPDKKPEMGGDVTGDGEDDIKTLLKALLAKLEGTATGDNADTPDDKDKKDPTGDGEDNE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EETTITGDSAYRAEVIIPGIDLSRKVKPTAFKRDVLAAADKTLVRQVVGDADIRKLPKQS CCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHH VDMAFNAVSEIAKGRNTRSTTGDAQRPGMGMTSIASLNKQNADFWSNRKG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]