| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142309
Identifier: 29142309
GI number: 29142309
Start: 1942315
End: 1943460
Strand: Reverse
Name: 29142309
Synonym: t1883
Alternate gene names: NA
Gene position: 1943460-1942315 (Counterclockwise)
Preceding gene: 29142310
Following gene: 29142308
Centisome position: 40.56
GC content: 54.62
Gene sequence:
>1146_bases ATGCCGCAGGGATTACCTGTATCAAACGTCGTTAATGTCGACGTGATCATTGGGCCGCGCGCGGCTACTGGTCGAAATTT TGGTTCACTGCTTATTCTCGGGACATCCACGGTCATTCCGGTGAAAGAGCGTCTTCGCCTCTACTCCTCAAAGGAGGACA TCGGATCTGATTTCGGCGTGGACAGCCCCGAATATGAAGCAGCAACAGTCTATTTCTCCCAGTCACCACGACCTAAAGAG GTGTATGTAGGTCGCTGGGCTAAAACACTGGCAACGGGTGAGGCGGGTGCTGCTGAAAAGCTGATGGATGCGGTTAACGC CGTAATGGGCTACACCAACTGGTATGGTCTCGGTATTGCAGACAAAGAGGATATTGCAGATGACGACTGGCTGAAGGTTG CTGCAGCCGTAGAAGCTTCGGGCGTCAGCCGCATTCTGGCAATTACCACCAGCGATCCCGCCACCTTTGACGCCACTTCA ACCGGGGATCTGTCCTACAAGCTGAAGGCGGCAAAATACGGGCGCACGTTCGTACAGTATTCTTCCAGCAGCAAGTACGC TGCGCTGTCCGCGTTTGGCCGCGCGTTTACGGTGAATTTCAACGGCAGCAATACCACCATTACCCTGAAATTTAAACAGG AGCCGGGGATCACTTACGAAACCCTGACGACTGATCAGGCGGCGGCGCTGGATGCCAAGAACTGCAACGTGTTTGTGTAC TACCAGAACGATACGGCAATCCTGCAGCAGGGCGTCATGTCCAGCGGTGATTTCTTTGATGAGCGCCACGGGCTCGACTG GCTGCAGAACTACGTTCAGACCAACCTGTATAACCTGCTGTACACCAGTACAACCAAAGTGCCTCAGACCGATGCGGGTG TTACACGTCTTCTGTCCAATGTTGAGCAGTCTATGGATCAGTCCGTGACGAACGGGCTGGTGGCTGCTGGCGTATGGAAC GGTGGCCCAATCGGGCAGCTGGATTCCGGAGACGCGCTGACAAAAGGGTATTACGTCTACGCGCAGCCGATTTCCGAGCA GGCGCAGGCAGACCGTGAAGCACGTAAGGCACCGGTTATTCAGGTTTCCTGTAAGCTGGCTGGCGCAGTGCATTTCGCTG ACGTACAGATCAACGTCGTTCGCTAA
Upstream 100 bases:
>100_bases CCGTTACGACATTACTGTGCGCCTTCGTCGCAAGGTGGTGCGCGAGTACGGCATTAAATCGCTGGTGGATGCACCAGTTT CATTCTTCGGAGATTAAATT
Downstream 100 bases:
>100_bases GGGGAAAATGAATGGCTACTTATTCTTTTATGGATGTCACCGCGTCCATTTCTGGCCCGACTGGCGAGATTGACCTGGGC TACGGTTCCGCCAGTTCAGA
Product: bacteriophage protein
Products: NA
Alternate protein names: Exported Phage Protein
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPQGLPVSNVVNVDVIIGPRAATGRNFGSLLILGTSTVIPVKERLRLYSSKEDIGSDFGVDSPEYEAATVYFSQSPRPKE VYVGRWAKTLATGEAGAAEKLMDAVNAVMGYTNWYGLGIADKEDIADDDWLKVAAAVEASGVSRILAITTSDPATFDATS TGDLSYKLKAAKYGRTFVQYSSSSKYAALSAFGRAFTVNFNGSNTTITLKFKQEPGITYETLTTDQAAALDAKNCNVFVY YQNDTAILQQGVMSSGDFFDERHGLDWLQNYVQTNLYNLLYTSTTKVPQTDAGVTRLLSNVEQSMDQSVTNGLVAAGVWN GGPIGQLDSGDALTKGYYVYAQPISEQAQADREARKAPVIQVSCKLAGAVHFADVQINVVR
Sequences:
>Translated_381_residues MPQGLPVSNVVNVDVIIGPRAATGRNFGSLLILGTSTVIPVKERLRLYSSKEDIGSDFGVDSPEYEAATVYFSQSPRPKE VYVGRWAKTLATGEAGAAEKLMDAVNAVMGYTNWYGLGIADKEDIADDDWLKVAAAVEASGVSRILAITTSDPATFDATS TGDLSYKLKAAKYGRTFVQYSSSSKYAALSAFGRAFTVNFNGSNTTITLKFKQEPGITYETLTTDQAAALDAKNCNVFVY YQNDTAILQQGVMSSGDFFDERHGLDWLQNYVQTNLYNLLYTSTTKVPQTDAGVTRLLSNVEQSMDQSVTNGLVAAGVWN GGPIGQLDSGDALTKGYYVYAQPISEQAQADREARKAPVIQVSCKLAGAVHFADVQINVVR >Mature_380_residues PQGLPVSNVVNVDVIIGPRAATGRNFGSLLILGTSTVIPVKERLRLYSSKEDIGSDFGVDSPEYEAATVYFSQSPRPKEV YVGRWAKTLATGEAGAAEKLMDAVNAVMGYTNWYGLGIADKEDIADDDWLKVAAAVEASGVSRILAITTSDPATFDATST GDLSYKLKAAKYGRTFVQYSSSSKYAALSAFGRAFTVNFNGSNTTITLKFKQEPGITYETLTTDQAAALDAKNCNVFVYY QNDTAILQQGVMSSGDFFDERHGLDWLQNYVQTNLYNLLYTSTTKVPQTDAGVTRLLSNVEQSMDQSVTNGLVAAGVWNG GPIGQLDSGDALTKGYYVYAQPISEQAQADREARKAPVIQVSCKLAGAVHFADVQINVVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41103; Mature: 40972
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQGLPVSNVVNVDVIIGPRAATGRNFGSLLILGTSTVIPVKERLRLYSSKEDIGSDFGV CCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCEECHHHHHHHHCCHHHCCCCCCC DSPEYEAATVYFSQSPRPKEVYVGRWAKTLATGEAGAAEKLMDAVNAVMGYTNWYGLGIA CCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCC DKEDIADDDWLKVAAAVEASGVSRILAITTSDPATFDATSTGDLSYKLKAAKYGRTFVQY CHHCCCCCHHHHEEHHHHHCCCEEEEEEEECCCCEECCCCCCCEEEEEEHHHCCCEEEEE SSSSKYAALSAFGRAFTVNFNGSNTTITLKFKQEPGITYETLTTDQAAALDAKNCNVFVY CCCCCEEEEEECCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCHHHEEECCCCEEEEE YQNDTAILQQGVMSSGDFFDERHGLDWLQNYVQTNLYNLLYTSTTKVPQTDAGVTRLLSN ECCCHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHH VEQSMDQSVTNGLVAAGVWNGGPIGQLDSGDALTKGYYVYAQPISEQAQADREARKAPVI HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEECCEEEEECCCCHHHHHHHHHHCCCEE QVSCKLAGAVHFADVQINVVR EEEEEEECEEEEEEEEEEEEC >Mature Secondary Structure PQGLPVSNVVNVDVIIGPRAATGRNFGSLLILGTSTVIPVKERLRLYSSKEDIGSDFGV CCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCEECHHHHHHHHCCHHHCCCCCCC DSPEYEAATVYFSQSPRPKEVYVGRWAKTLATGEAGAAEKLMDAVNAVMGYTNWYGLGIA CCCCCCEEEEEECCCCCCCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEECCCC DKEDIADDDWLKVAAAVEASGVSRILAITTSDPATFDATSTGDLSYKLKAAKYGRTFVQY CHHCCCCCHHHHEEHHHHHCCCEEEEEEEECCCCEECCCCCCCEEEEEEHHHCCCEEEEE SSSSKYAALSAFGRAFTVNFNGSNTTITLKFKQEPGITYETLTTDQAAALDAKNCNVFVY CCCCCEEEEEECCEEEEEEECCCCEEEEEEECCCCCCEEEEECCCHHHEEECCCCEEEEE YQNDTAILQQGVMSSGDFFDERHGLDWLQNYVQTNLYNLLYTSTTKVPQTDAGVTRLLSN ECCCHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHH VEQSMDQSVTNGLVAAGVWNGGPIGQLDSGDALTKGYYVYAQPISEQAQADREARKAPVI HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEECCEEEEECCCCHHHHHHHHHHCCCEE QVSCKLAGAVHFADVQINVVR EEEEEEECEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA