| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29142308
Identifier: 29142308
GI number: 29142308
Start: 1941863
End: 1942303
Strand: Reverse
Name: 29142308
Synonym: t1882
Alternate gene names: NA
Gene position: 1942303-1941863 (Counterclockwise)
Preceding gene: 29142309
Following gene: 29142307
Centisome position: 40.53
GC content: 53.74
Gene sequence:
>441_bases ATGGCTACTTATTCTTTTATGGATGTCACCGCGTCCATTTCTGGCCCGACTGGCGAGATTGACCTGGGCTACGGTTCCGC CAGTTCAGAGGAGGGGATCACCGTTGCAATGGGCGGCCCCAAAAACACCATGACCATCGGTGCTGACGGCGAAGTGATGC ACAGCCTGCACGCGGATAAAAGCGGTACGGTAACTGTCAATCTGCTGAAGACCTCGCCGACAAACAAAAAACTGTCGCTG GCGTATAACGCACAGAGTCAGTCCTCAGGAACCTGGGGAAACAACGTCATTGTGATCCGAAATAAGGTGAGCGGAGACAT CATCACGGCGCGCAGTGTGGCCTTCCAGAAACAGCCGGATAACGCCAACGCGAAAGCCGGTAATACGATGCCCTGGGTAT TTGACTGCGGCAAAATCGACCAGGTACTCGGAGAGTTTTAA
Upstream 100 bases:
>100_bases AAGCACGTAAGGCACCGGTTATTCAGGTTTCCTGTAAGCTGGCTGGCGCAGTGCATTTCGCTGACGTACAGATCAACGTC GTTCGCTAAGGGGAAAATGA
Downstream 100 bases:
>100_bases CAGATGGAATGTTCAGTCAAAGGCCACGATTATCGCGTGGCGAAACTCAGCGTTTTTGACCAGCTGAAAGTCACCCGTAA ATTGCTGCCGGTGCTGGCGG
Product: bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MATYSFMDVTASISGPTGEIDLGYGSASSEEGITVAMGGPKNTMTIGADGEVMHSLHADKSGTVTVNLLKTSPTNKKLSL AYNAQSQSSGTWGNNVIVIRNKVSGDIITARSVAFQKQPDNANAKAGNTMPWVFDCGKIDQVLGEF
Sequences:
>Translated_146_residues MATYSFMDVTASISGPTGEIDLGYGSASSEEGITVAMGGPKNTMTIGADGEVMHSLHADKSGTVTVNLLKTSPTNKKLSL AYNAQSQSSGTWGNNVIVIRNKVSGDIITARSVAFQKQPDNANAKAGNTMPWVFDCGKIDQVLGEF >Mature_145_residues ATYSFMDVTASISGPTGEIDLGYGSASSEEGITVAMGGPKNTMTIGADGEVMHSLHADKSGTVTVNLLKTSPTNKKLSLA YNAQSQSSGTWGNNVIVIRNKVSGDIITARSVAFQKQPDNANAKAGNTMPWVFDCGKIDQVLGEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15291; Mature: 15160
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYSFMDVTASISGPTGEIDLGYGSASSEEGITVAMGGPKNTMTIGADGEVMHSLHADK CCEEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCC SGTVTVNLLKTSPTNKKLSLAYNAQSQSSGTWGNNVIVIRNKVSGDIITARSVAFQKQPD CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCC NANAKAGNTMPWVFDCGKIDQVLGEF CCCCCCCCCCCEEEECCCHHHHHCCC >Mature Secondary Structure ATYSFMDVTASISGPTGEIDLGYGSASSEEGITVAMGGPKNTMTIGADGEVMHSLHADK CEEEEEEEEEECCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEECCCCCEEEEECCCC SGTVTVNLLKTSPTNKKLSLAYNAQSQSSGTWGNNVIVIRNKVSGDIITARSVAFQKQPD CCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEEECCC NANAKAGNTMPWVFDCGKIDQVLGEF CCCCCCCCCCCEEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA