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The map label for this gene is sseG

Identifier: 29141734

GI number: 29141734

Start: 1343160

End: 1343849

Strand: Direct

Name: sseG

Synonym: t1273

Alternate gene names: NA

Gene position: 1343160-1343849 (Clockwise)

Preceding gene: 29141733

Following gene: 29141735

Centisome position: 28.03

GC content: 48.55

Gene sequence:

>690_bases
ATGAAACCTGTTAGCCCAAATGCTCAGGTCGGAGGGCAACGTCCTGTTAACGCGCCTGAGGAATCACCTCCATGTCCCTC
ATTGCCACATCCGGAAACCAATATGGAGAGTGGTAGAATTGGACCTCAACAAGGAAAAGAGCGGTTATTGGCCGGACTTG
CGAAACGAGTGATAGAGTGTTTTCCAAAAGAAATTTTTAGTTGGCAAACGGTCATTTTGGGCGGACAGATTTTATGCTGT
TCCGCTGGAATAGCATTAACAGTGCTAAGTGGTGGAGGCGCACCGCTCGTAGCCCTGGCAGGAATTGGCCTTGCTATTGC
CATCGCGGATGTCGCCTGTCTTATCTACCATCATAAACATCATTTGCCTATGGCTCACGACAGTATAGGCAATGCCGTTT
TTTATATTGCTAATTGTTTCGCCAATCAACGCAAAAGTATGGCGATTGCTAAAGCCGTCTCCCTGGGCGGTAGATTAGCC
TTAACCGCGACGGTAGTGACGCATTCATACTGGAGTGGGAGTTTGGGACTACAGCCTCACTTATTAGAGCATCTTAATGA
TCTTACCTACGGACTAATGAGTTTTACTCGCTTCGGTATGGATGGGATGGCAATGACCGGTATGCAGGTCAGCAGCCCAT
TATATCGTTTGCTGGCTCAGGTGACGCCAGAACAACGTGCGCCGGAGTAA

Upstream 100 bases:

>100_bases
ATCCCAGTGTGTTATTGGCGGAACAAATGGCATTGCTCTGTCAATCTGCTACTACACCTGCATTAATGGACAGTTCTGGT
CATACATCTCGGGGAGAACC

Downstream 100 bases:

>100_bases
TCGTTTTCAGGTATATACCGGATGTTCATTGCTTTCTAAATTTTGCTATGTTGCCAGTATCCTTACGATGTATTTATTTT
AAGGAAAAGCATTATGGATA

Product: pathogenicity island effector protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIECFPKEIFSWQTVILGGQILCC
SAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKHHLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLA
LTATVVTHSYWSGSLGLQPHLLEHLNDLTYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE

Sequences:

>Translated_229_residues
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIECFPKEIFSWQTVILGGQILCC
SAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKHHLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLA
LTATVVTHSYWSGSLGLQPHLLEHLNDLTYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE
>Mature_229_residues
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIECFPKEIFSWQTVILGGQILCC
SAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKHHLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLA
LTATVVTHSYWSGSLGLQPHLLEHLNDLTYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24332; Mature: 24332

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIEC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FPKEIFSWQTVILGGQILCCSAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKH
HHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
HLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLALTATVVTHSYWSGSLGLQPH
CCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCCHH
LLEHLNDLTYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE
HHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKPVSPNAQVGGQRPVNAPEESPPCPSLPHPETNMESGRIGPQQGKERLLAGLAKRVIEC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
FPKEIFSWQTVILGGQILCCSAGIALTVLSGGGAPLVALAGIGLAIAIADVACLIYHHKH
HHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
HLPMAHDSIGNAVFYIANCFANQRKSMAIAKAVSLGGRLALTATVVTHSYWSGSLGLQPH
CCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHCCCCCCCCCHH
LLEHLNDLTYGLMSFTRFGMDGMAMTGMQVSSPLYRLLAQVTPEQRAPE
HHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA