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The map label for this gene is cdgR [H]

Identifier: 29141689

GI number: 29141689

Start: 1291241

End: 1291954

Strand: Direct

Name: cdgR [H]

Synonym: t1225

Alternate gene names: 29141689

Gene position: 1291241-1291954 (Clockwise)

Preceding gene: 29141688

Following gene: 29141690

Centisome position: 26.95

GC content: 45.8

Gene sequence:

>714_bases
ATGATTGCTTCACTTGATGAGCTTTACCATTCCGAACTCTTTTTCCTTCCCGTCATGGATGAAAACGCTCGGCTTGTTGG
TTTAGAGATTATTGCAACGTTTGCCGCTGAAGACGGCGCCGTGCGGATGCCGACTGAGTTGGTAGCGCCTCGCCTTTCGG
TGGAGGAACAATACTGTCTGTTTGTTGAAAAACTGGCGTTGTTAGAAACCTGTCAGCACTTTTTTATTCAGCATAAACTT
ATTGCATGGCTTAATTTACCGCCTGCAATTAGTGACTTATTATTATTAGATAGCGAACTTTTTTCCCGGGCAGCGCGCTT
TCCGTTTTTTGAAGTAGCTATAAATGAGAATTATCCTGGGTTAAACCAGGGCAAAAACAATGAAACGTTAGCTAATCTGG
CAATGCATTTCCCATTAATTTTGGCAAATTTTGGGGCAGGCGAGGCGTCGACTAAAGCTATTTTCGATGGGCTTTTCAAA
CGAGTCATGTTGGATAAAAATTTTATTCAGCAGCGAGCTGAAATGATCTCATTCGAACCATTCATGCACGCTATTGTTGC
CCAGATCTCCTCCAGCTGCGAGTCGCTGATGATTGCCGGTATTGATACTGAGGCGATGTTTGCGCGCGCAGCGCCATTGG
GGTTTAGCGCATTCCAGGGCGGACTATGGCCTCCGGTGCCGGTAAGCCAGCTCATTAAACTCGTTCAGCGATAA

Upstream 100 bases:

>100_bases
CAAGAAAAATGATGACGCTTCAATTAGTATCTGAAGTTACGTCTGTTTCCGTCCGTAGTGACTGGATGGTGAATAGCGCC
CTAACCATGGGACTGGCGTA

Downstream 100 bases:

>100_bases
CCTTTCTGTTTGCCGGTGTTTAACCGGTGATTAACCGTCTACACTGAAGACAGGAGGCCCTATGACCCTGTCTTTTACTG
CCCGTTGGCGCGATGAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: c-diGMP regulator [H]

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKL
IAWLNLPPAISDLLLLDSELFSRAARFPFFEVAINENYPGLNQGKNNETLANLAMHFPLILANFGAGEASTKAIFDGLFK
RVMLDKNFIQQRAEMISFEPFMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVSQLIKLVQR

Sequences:

>Translated_237_residues
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKL
IAWLNLPPAISDLLLLDSELFSRAARFPFFEVAINENYPGLNQGKNNETLANLAMHFPLILANFGAGEASTKAIFDGLFK
RVMLDKNFIQQRAEMISFEPFMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVSQLIKLVQR
>Mature_237_residues
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCLFVEKLALLETCQHFFIQHKL
IAWLNLPPAISDLLLLDSELFSRAARFPFFEVAINENYPGLNQGKNNETLANLAMHFPLILANFGAGEASTKAIFDGLFK
RVMLDKNFIQQRAEMISFEPFMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVSQLIKLVQR

Specific function: Required for resistance to host phagocyte oxidase [H]

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1788000, Length=233, Percent_Identity=52.3605150214592, Blast_Score=263, Evalue=1e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 26426; Mature: 26426

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCL
CCCCHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHCCCCCEECCHHHHCCCCCCCHHHHH
FVEKLALLETCQHFFIQHKLIAWLNLPPAISDLLLLDSELFSRAARFPFFEVAINENYPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
LNQGKNNETLANLAMHFPLILANFGAGEASTKAIFDGLFKRVMLDKNFIQQRAEMISFEP
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVSQLIKLVQR
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIASLDELYHSELFFLPVMDENARLVGLEIIATFAAEDGAVRMPTELVAPRLSVEEQYCL
CCCCHHHHHHCCEEEEEEECCCCEEEHHHHHHHHHCCCCCEECCHHHHCCCCCCCHHHHH
FVEKLALLETCQHFFIQHKLIAWLNLPPAISDLLLLDSELFSRAARFPFFEVAINENYPG
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC
LNQGKNNETLANLAMHFPLILANFGAGEASTKAIFDGLFKRVMLDKNFIQQRAEMISFEP
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMHAIVAQISSSCESLMIAGIDTEAMFARAAPLGFSAFQGGLWPPVPVSQLIKLVQR
HHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA