Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is astB [H]
Identifier: 29141650
GI number: 29141650
Start: 1253794
End: 1255137
Strand: Direct
Name: astB [H]
Synonym: t1185
Alternate gene names: 29141650
Gene position: 1253794-1255137 (Clockwise)
Preceding gene: 29141649
Following gene: 29141651
Centisome position: 26.16
GC content: 56.25
Gene sequence:
>1344_bases ATGACGGCGCATGAAGTTAATTTTGACGGGCTGGTGGGGCTTACGCACCATTATGCCGGGCTATCCTTCGGCAATGAGGC ATCGACCCGCCACCGTTTTCAGGTGTCGAATCCTCGTCTGGCGGTAAAGCAGGGGCTGCTAAAGATGAAAGCTCTGGCGG ATGCCGGCTTTCCCCAGGCGGTGATCCCGCCGCATGAGCGGCCCTTTATTCCGGCGTTACGTCAGCTCGGCTTCACGGGT AGCGATGAGCAGATTCTGGATAAGGTTGCGCGTCAGGCGCCACGCTGGCTTTCCAGCGTGAGTTCCGCGTCGCCAATGTG GGTTGCGAATGCGGCGACGGTTTGCCCATCGGCAGACGCGCTGGACGGGAAAGTTCACCTGACGGTGGCGAATTTAAACA ATAAATTTCATCGCGCTCTTGAGGCGCCTGTTACCGAAGCGCTGCTACGCGCCATATTTCGCGATGAAAGTCAGTTTTCA GTGCATAGCGCGTTACCGCAGGTCGCATTATTGGGAGATGAAGGCGCGGCGAATCATAACCGTCTTGGCGGCGAGTATGG TTCGGCAGGCGTGCAGCTTTTTGTCTATGGGCGCGAAGAGGAGAATGAAATACGACCCGCTCGTTATCCGGCGCGCCAGA GCCGCGAAGCCAGCGAGGCCGTGGCGCGTCTTAATCAGGTGAATCCGCAACAGGTTATCTTCGCTCAGCAAAACCCGGAG GTCATCGATCAAGGCGTATTCCATAATGATGTCATCGCCGTTTCGAATCGACAGGTATTGTTTTGTCACGAAGCGGCGTT TGCCCGGCAGAAAGTGCTCATTAATCAGTTGCGTACGCGCGTTGACGGTTTTATGGCGATAGAGGTGCCCGCCGGAGAGG TTTCTGTATCAGATGCTGTGGCCACCTACCTGTTTAATAGTCAGTTGTTAAGCCGTGACGACGGCTCAATGCTGTTAGTG TTGCCGCGGGAATGTCAGGACCATGCCGGCGTCTGGCGCTATCTGAATAAGCTGGTGGCGGAGGATAACCCCATCAGCGC GATGCAGGTGTTTGATTTGCGAGAAAGTATGGCCAACGGCGGCGGCCCGGCCTGTCTGCGATTACGCGTGGTGTTAACAG AAGAAGAACGACGGGCGGTGAATCCAGCGGTAATGATGAATGACGCTCTGTTTACGGCCCTTAACGCGTGGGCGGATCGT TATTATCGCGATCGCCTGACCGCTGCCGATCTGGCCGATCCGTTATTATTGCGAGAAGGCCGGGAGGCGCTGGATGTGTT AACGCGTCTGCTGGATTTGGGGTCGGTTTATCCTTTCCAGCAAACGGGGGCGGCTGATGGATAA
Upstream 100 bases:
>100_bases CCGATTATTGCGCCTGGCCGATGGCCAGTCTGGAATCTCCCGAACTGACGTTGCCTGCGACATTAAGCCCTGGCCTCGAC TTTTCTCGCAGGGAGGCGGT
Downstream 100 bases:
>100_bases CTTTCTGGCGTTGACGCTAAGCGGCACGACACCACGGGTGACGCAGGGGAAGGGCGCGGGTTTTCGCTGGCGCTGGTTAG GCCATGGTCTGCTTGAACTC
Product: succinylarginine dihydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQAVIPPHERPFIPALRQLGFTG SDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFS VHSALPQVALLGDEGAANHNRLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAVATYLFNSQLLSRDDGSMLLV LPRECQDHAGVWRYLNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADR YYRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG
Sequences:
>Translated_447_residues MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQAVIPPHERPFIPALRQLGFTG SDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFS VHSALPQVALLGDEGAANHNRLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAVATYLFNSQLLSRDDGSMLLV LPRECQDHAGVWRYLNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADR YYRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG >Mature_446_residues TAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQAVIPPHERPFIPALRQLGFTGS DEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADALDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFSV HSALPQVALLGDEGAANHNRLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPEV IDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAVATYLFNSQLLSRDDGSMLLVL PRECQDHAGVWRYLNKLVAEDNPISAMQVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADRY YRDRLTAADLADPLLLREGREALDVLTRLLDLGSVYPFQQTGAADG
Specific function: Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) [H]
COG id: COG3724
COG function: function code E; Succinylarginine dihydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the succinylarginine dihydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1788041, Length=447, Percent_Identity=85.6823266219239, Blast_Score=800, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007079 [H]
Pfam domain/function: PF04996 AstB [H]
EC number: =3.5.3.23 [H]
Molecular weight: Translated: 49139; Mature: 49008
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQA CCCCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC VIPPHERPFIPALRQLGFTGSDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHCCCCCCC LDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFSVHSALPQVALLGDEGAANHN CCCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCC RLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEECCCCH VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAV HHHCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH ATYLFNSQLLSRDDGSMLLVLPRECQDHAGVWRYLNKLVAEDNPISAMQVFDLRESMANG HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADRYYRDRLTAADLADPLLLREG CCCEEEEEEEEEECCHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCC REALDVLTRLLDLGSVYPFQQTGAADG HHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TAHEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAVKQGLLKMKALADAGFPQA CCCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC VIPPHERPFIPALRQLGFTGSDEQILDKVARQAPRWLSSVSSASPMWVANAATVCPSADA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHCCCCCCC LDGKVHLTVANLNNKFHRALEAPVTEALLRAIFRDESQFSVHSALPQVALLGDEGAANHN CCCEEEEEEECCCHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCCCC RLGGEYGSAGVQLFVYGREEENEIRPARYPARQSREASEAVARLNQVNPQQVIFAQQNPE CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEECCCCH VIDQGVFHNDVIAVSNRQVLFCHEAAFARQKVLINQLRTRVDGFMAIEVPAGEVSVSDAV HHHCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHH ATYLFNSQLLSRDDGSMLLVLPRECQDHAGVWRYLNKLVAEDNPISAMQVFDLRESMANG HHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC GGPACLRLRVVLTEEERRAVNPAVMMNDALFTALNAWADRYYRDRLTAADLADPLLLREG CCCEEEEEEEEEECCHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHCC REALDVLTRLLDLGSVYPFQQTGAADG HHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA