Click here to switch to the map view.

The map label for this gene is mipA [H]

Identifier: 29141633

GI number: 29141633

Start: 1232074

End: 1232820

Strand: Direct

Name: mipA [H]

Synonym: t1165

Alternate gene names: 29141633

Gene position: 1232074-1232820 (Clockwise)

Preceding gene: 29141628

Following gene: 29141634

Centisome position: 25.71

GC content: 51.41

Gene sequence:

>747_bases
GTGACCAAACTTAAACTTCTGGCTCTTGGCGTGTTTATTGCAACATCCGCCAGCGTCGCGCACGCTGAAAGCAACCTGAC
GTTGGGCGCAGGCGTTGGTGTGGTTGAACACCCTTATAAAGATTACGATAGCGATGTTTATCCGATACCGGTCATCGCTT
ATGAAAGCGAAAACTTCTGGTTCCGTGGTCTGGGCGGCGGGTACTACTTGTGGAATGACAATGCCGATAAGTTGTCAATC
ATGGCATACTGGTCCCCGATGTACTTCAAACCGGGCGACAGCGATGACCATCAGTTGCGTCGTCTGGACAGGCGTAAAAG
TACTATGATGGCGGGCGTTTCTTACGCGCACCACACCCAGTATGGATTCCTGCGTACCTCACTGGCAGGGGATACGTTAG
ATAACAGTAACGGTATTGTCTGGGATCTGGCCTGGCTGTATCGGTATACCAATGGCGGGCTGACCTTAACGCCAGGTATC
GGGGTTGAATGGAATAGCGAGAACCAGAACGATTACTATTACGGCGTATCACGTAAAGAATCTTCGCGTAGCGGCCTGCG
CGGCTATAACCCGAACGATAGCTGGAACCCGTATCTTGAACTGAGCGCTAACTATAATTTCGCCGGTAACTGGAGCGTAT
ATGGTACTGCGCGCTACACCCGCCTGTCGGATGAAATTACCGACAGCCCGATGGTGGATAAATCCTGGACCGGTATCCTT
TCTACTGGCGTGACCTATAGATTCTGA

Upstream 100 bases:

>100_bases
ATGGTGATATTAAACGGTTACATTGTGTAAAATAGTTGGGCTTACAGGTATTGGCGGTTACACTTTTGCCGCAGAACATT
TGAATAAGGAATTATGGATT

Downstream 100 bases:

>100_bases
TTGATTGAATTTGCCGGAAAAACCATGACAAAGCCTGCGTTATGCGGGCTTTGTGCTGTCTGAAACGCGAACATGGCGGC
TTGCATAAATGCGCTGTTGA

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTKLKLLALGVFIATSASVAHAESNLTLGAGVGVVEHPYKDYDSDVYPIPVIAYESENFWFRGLGGGYYLWNDNADKLSI
MAYWSPMYFKPGDSDDHQLRRLDRRKSTMMAGVSYAHHTQYGFLRTSLAGDTLDNSNGIVWDLAWLYRYTNGGLTLTPGI
GVEWNSENQNDYYYGVSRKESSRSGLRGYNPNDSWNPYLELSANYNFAGNWSVYGTARYTRLSDEITDSPMVDKSWTGIL
STGVTYRF

Sequences:

>Translated_248_residues
MTKLKLLALGVFIATSASVAHAESNLTLGAGVGVVEHPYKDYDSDVYPIPVIAYESENFWFRGLGGGYYLWNDNADKLSI
MAYWSPMYFKPGDSDDHQLRRLDRRKSTMMAGVSYAHHTQYGFLRTSLAGDTLDNSNGIVWDLAWLYRYTNGGLTLTPGI
GVEWNSENQNDYYYGVSRKESSRSGLRGYNPNDSWNPYLELSANYNFAGNWSVYGTARYTRLSDEITDSPMVDKSWTGIL
STGVTYRF
>Mature_247_residues
TKLKLLALGVFIATSASVAHAESNLTLGAGVGVVEHPYKDYDSDVYPIPVIAYESENFWFRGLGGGYYLWNDNADKLSIM
AYWSPMYFKPGDSDDHQLRRLDRRKSTMMAGVSYAHHTQYGFLRTSLAGDTLDNSNGIVWDLAWLYRYTNGGLTLTPGIG
VEWNSENQNDYYYGVSRKESSRSGLRGYNPNDSWNPYLELSANYNFAGNWSVYGTARYTRLSDEITDSPMVDKSWTGILS
TGVTYRF

Specific function: May serve as a scaffold protein required for the formation of a complex with mrcB/ponB and mltA, this complex could play a role in enlargement and septation of the murein sacculus [H]

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mipA/ompV family [H]

Homologues:

Organism=Escherichia coli, GI1788082, Length=248, Percent_Identity=84.2741935483871, Blast_Score=443, Evalue=1e-126,
Organism=Escherichia coli, GI1790010, Length=245, Percent_Identity=40.8163265306122, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010583 [H]

Pfam domain/function: PF06629 MipA [H]

EC number: NA

Molecular weight: Translated: 27992; Mature: 27861

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLKLLALGVFIATSASVAHAESNLTLGAGVGVVEHPYKDYDSDVYPIPVIAYESENFW
CCCEEEEEEEEHHHCCCHHEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCE
FRGLGGGYYLWNDNADKLSIMAYWSPMYFKPGDSDDHQLRRLDRRKSTMMAGVSYAHHTQ
EEECCCEEEEECCCCCEEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHCCC
YGFLRTSLAGDTLDNSNGIVWDLAWLYRYTNGGLTLTPGIGVEWNSENQNDYYYGVSRKE
CCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEECCCCCEEECCCCCCCEEEEECCCC
SSRSGLRGYNPNDSWNPYLELSANYNFAGNWSVYGTARYTRLSDEITDSPMVDKSWTGIL
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEE
STGVTYRF
ECCEEECC
>Mature Secondary Structure 
TKLKLLALGVFIATSASVAHAESNLTLGAGVGVVEHPYKDYDSDVYPIPVIAYESENFW
CCEEEEEEEEHHHCCCHHEECCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCE
FRGLGGGYYLWNDNADKLSIMAYWSPMYFKPGDSDDHQLRRLDRRKSTMMAGVSYAHHTQ
EEECCCEEEEECCCCCEEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCHHHHCCC
YGFLRTSLAGDTLDNSNGIVWDLAWLYRYTNGGLTLTPGIGVEWNSENQNDYYYGVSRKE
CCEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEECCCCCEEECCCCCCCEEEEECCCC
SSRSGLRGYNPNDSWNPYLELSANYNFAGNWSVYGTARYTRLSDEITDSPMVDKSWTGIL
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCEE
STGVTYRF
ECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10037771; 10806384 [H]