| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is phsA [H]
Identifier: 29141308
GI number: 29141308
Start: 906205
End: 908481
Strand: Direct
Name: phsA [H]
Synonym: t0809
Alternate gene names: 29141308
Gene position: 906205-908481 (Clockwise)
Preceding gene: 29141306
Following gene: 29141309
Centisome position: 18.91
GC content: 55.12
Gene sequence:
>2277_bases ATGAGCATTAGTCGTCGTTCTTTTTTGCAGGGGGTAGGCATAGGCTGCTCTGCCTGCGCGCTGGGCGCTTTTCCGCCCGG GGCGCTGGCGCGCAACCCGATTGCCGGCATTAACGGTAAAACCACGCTAACGCCAAGTTTGTGCGAAATGTGTTCCTTTC GTTGCCCTATTCAGGCGCAGGTAGTCAATAACAAGACCGTTTTTATCCAGGGCAATCCTTCTGCGCCGCAGCAGGGGACG CGCATATGCGCCAGGGGCGGGAGCGGCGTCAGCCTGGTCAATGACCCGCAACGGATTGTAAAACCTATGAAACGCACCGG GCCACGCGGTGACGGTGAATGGCAGGTGATTAGCTGGCAACAGGCTTACCAGGAAATCGCGGCGAAAATGAATGCCATCA AAGCGCAGCATGGCCCCGAGAGCGTGGCTTTCTCTTCCAAATCGGGCTCGCTCTCCAGCCATCTTTTCCATCTGGCTACG GCCTTTGGTTCGCCTAATACCTTTACTCACGCCTCAACATGCCCTGCCGGGAAAGCCATTGCGGCAAAAGTGATGATGGG CGGCGATCTGGCGATGGATATCGCTAACACGCGCTATCTGGTTTCGTTTGGCCACAATTTGTATGAAGGGATTGAAGTTG CCGATACCCATGAGTTAATGACCGCGCAGGAGAAGGGGGCCAAAATGGTGAGCTTCGATCCGCGTTTGTCGATATTTTCC AGCAAGGCGGATGAGTGGCACGCTATTCGTCCCGGAGGGGATTTAGCGGTTCTGCTGGCGATGTGCCACGTCATGATTGA TGAACAACTCTACGATGCGTCTTTTGTTGAGCGTTATACCAGCGGATTTGAACAGTTAGCACAGGCGGTAAAAGAGACGA CGTCGGAATGGGCCGCCGCGCAGGCCGATGTCCCAGCCGACGTCATTGTCCGGGTGACACGCGAACTGGCCGCCTGTGCG CCTCACGCTATTGTCAGTCCTGGTCATCGCGCGACGTTCTCGCAGGAAGAGATCGATATGCGGCGTATGATTTTTACGCT TAATGTGCTGCTCGGTAATATTGAGCGCGAAGGCGGGCTATATCAGAAAAAAAACGCGTCGGTTTACAACAAACTGGCCG GAGAAAAGGTCGCGCCAACGCTGGCGAAACTCAACATTAAAAATATGCCGAAACCGACGGCGCAACGAATCGATCTGGTC GCACCTCAGTTTAAATATATCGCCGCTGGCGGCGGCGTGGTGCAAAGCATTATTGACGCGGCGTTAACCCAGAAGCCTTA CCCGATAAAGGCGTGGATTATGTCGCGGCATAATCCTTTCCAGACCGTCACCTGTCGTTCGGACCTGGTAAAAACCGTTG AGCAACTGGATCTGGTGGTCAGCTGCGATGTCTATTTGAGCGAGAGCGCGGCATATGCCGACTATCTGCTGCCGGAATGC ACCTATCTCGAACGGGACGAAGAGGTATCCGATATGTCGGGTCTGCACCCGGCTTACGCTCTGCGCCAACAGGTCGTAGA GCCGATTGGCGAGGCGCGTCCGAGTTGGCAAATCTGGAAAGAACTTGGCGAGCAGTTGGGATTAGGGCAGTACTATCCGT GGCAGGATATGCAGACGCGCCAACTCTATCAGTTGAACGGCGACCATGCCTTAGCGAAGGAACTGCGACAGAAAGGGTAT CTCGAATGGGGCGTTCCGCTGCTATTACGCGAACCAGAATCCGTTCGTCAGTTTACGGCGCGTTACCCCGGCGCTATCGC GACGGACAGTGACAACACCTATGGCGAACAGCTTCGCTTCAAATCGCCCTCCGGCAAAATCGAACTTTATTCCGCAACCC TGGAGGAATTGCTCCCTGGCTACGGCGTTCCGCGCGTTCGTGACTTTGCGCTGAAAAAAGAGAATGAGCTTTACTTCATT CAAGGCAAGGTGGCCGTGCATACCAATGGCGCGACGCAGTACGTACCTTTACTCAGCGAGCTAATGTGGGATAACGCGGT CTGGGTCCATCCGCAAACAGCGCAAGAAAAAGGCATTAAGACCGGCGATGAGATCTGGCTGGAAAATGCCACGGGTAAAG AGAAAGGTAAGGCGCTGGTGACGCCCGGTATTCGCCCGGATACGCTTTTTGTCTATATGGGATTTGGCGCTAAAGCTGGG GCTAAAACGGCGGCGACGACACACGGTATCCACTCTGGCAATTTACTGCCGCACGTGACGAGTCCGGTATCCGGTACGGT AGTGCATACCGCAGGCGTGACGCTGAGCCGGGCATGA
Upstream 100 bases:
>100_bases CATGCTCATATTAACAACTATTTCAAATTGTGATTGAAGCCGACATTTCATAATACAAATTAAATATAATCTTCAGCTAT ATCTAATAACAGGAGGTTAT
Downstream 100 bases:
>100_bases GGGAGGAGGGAACCATGAATCATTTAACGAATCAGTACGTCATGCTGCATGATGAAAAACGTTGTATCGGCTGCCAGGCG TGTACCGTTGCCTGCAAAGT
Product: thiosulfate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 758; Mature: 757
Protein sequence:
>758_residues MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGT RICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQQAYQEIAAKMNAIKAQHGPESVAFSSKSGSLSSHLFHLAT AFGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTSEWAAAQADVPADVIVRVTRELAACA PHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLV APQFKYIAAGGGVVQSIIDAALTQKPYPIKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGY LEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFI QGKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG AKTAATTHGIHSGNLLPHVTSPVSGTVVHTAGVTLSRA
Sequences:
>Translated_758_residues MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGT RICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQQAYQEIAAKMNAIKAQHGPESVAFSSKSGSLSSHLFHLAT AFGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTSEWAAAQADVPADVIVRVTRELAACA PHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLV APQFKYIAAGGGVVQSIIDAALTQKPYPIKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGY LEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFI QGKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG AKTAATTHGIHSGNLLPHVTSPVSGTVVHTAGVTLSRA >Mature_757_residues SISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQVVNNKTVFIQGNPSAPQQGTR ICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQQAYQEIAAKMNAIKAQHGPESVAFSSKSGSLSSHLFHLATA FGSPNTFTHASTCPAGKAIAAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFSS KADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTSEWAAAQADVPADVIVRVTRELAACAP HAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGLYQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLVA PQFKYIAAGGGVVQSIIDAALTQKPYPIKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPECT YLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTRQLYQLNGDHALAKELRQKGYL EWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRFKSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFIQ GKVAVHTNGATQYVPLLSELMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAGA KTAATTHGIHSGNLLPHVTSPVSGTVVHTAGVTLSRA
Specific function: Oxidoreductase which produces hydrogen sulfide from thiosulfate (Potential) [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm Face Of The Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787870, Length=835, Percent_Identity=26.3473053892216, Blast_Score=195, Evalue=1e-50, Organism=Escherichia coli, GI87081797, Length=791, Percent_Identity=25.4108723135272, Blast_Score=182, Evalue=8e-47, Organism=Escherichia coli, GI171474008, Length=828, Percent_Identity=25, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI3868721, Length=726, Percent_Identity=24.3801652892562, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI1787231, Length=717, Percent_Identity=21.8967921896792, Blast_Score=102, Evalue=9e-23, Organism=Escherichia coli, GI87081994, Length=795, Percent_Identity=22.1383647798742, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788534, Length=826, Percent_Identity=20.4600484261501, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: 1.8.99.- [C]
Molecular weight: Translated: 82758; Mature: 82627
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1 ; PS00490 MOLYBDOPTERIN_PROK_2 ; PS00932 MOLYBDOPTERIN_PROK_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQ CCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEE VVNNKTVFIQGNPSAPQQGTRICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQ EECCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHH QAYQEIAAKMNAIKAQHGPESVAFSSKSGSLSSHLFHLATAFGSPNTFTHASTCPAGKAI HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH AAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS HHHHEECCCEEEECCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHC SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTSEWAAA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QADVPADVIVRVTRELAACAPHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGL CCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC YQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLVAPQFKYIAAGGGVVQSIIDA CCCCCCHHHHHHCCCHHCCHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHH ALTQKPYPIKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC HHCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHCEEEEECEEECCCHHHHHHHCCCC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTR CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH QLYQLNGDHALAKELRQKGYLEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRF HHEEECCCHHHHHHHHHCCCEECCCCEEEECCHHHHHHHHHCCCCEECCCCCCCCCCEEE KSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFIQGKVAVHTNGATQYVPLLSE ECCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHH LMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG HHHCCEEEECCCHHHHCCCCCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCC AKTAATTHGIHSGNLLPHVTSPVSGTVVHTAGVTLSRA CCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEECC >Mature Secondary Structure SISRRSFLQGVGIGCSACALGAFPPGALARNPIAGINGKTTLTPSLCEMCSFRCPIQAQ CCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHCCCCCEEEE VVNNKTVFIQGNPSAPQQGTRICARGGSGVSLVNDPQRIVKPMKRTGPRGDGEWQVISWQ EECCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHH QAYQEIAAKMNAIKAQHGPESVAFSSKSGSLSSHLFHLATAFGSPNTFTHASTCPAGKAI HHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH AAKVMMGGDLAMDIANTRYLVSFGHNLYEGIEVADTHELMTAQEKGAKMVSFDPRLSIFS HHHHEECCCEEEECCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHCCEEEECCCCHHHHC SKADEWHAIRPGGDLAVLLAMCHVMIDEQLYDASFVERYTSGFEQLAQAVKETTSEWAAA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QADVPADVIVRVTRELAACAPHAIVSPGHRATFSQEEIDMRRMIFTLNVLLGNIEREGGL CCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC YQKKNASVYNKLAGEKVAPTLAKLNIKNMPKPTAQRIDLVAPQFKYIAAGGGVVQSIIDA CCCCCCHHHHHHCCCHHCCHHHHCCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHH ALTQKPYPIKAWIMSRHNPFQTVTCRSDLVKTVEQLDLVVSCDVYLSESAAYADYLLPEC HHCCCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHCEEEEECEEECCCHHHHHHHCCCC TYLERDEEVSDMSGLHPAYALRQQVVEPIGEARPSWQIWKELGEQLGLGQYYPWQDMQTR CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCH QLYQLNGDHALAKELRQKGYLEWGVPLLLREPESVRQFTARYPGAIATDSDNTYGEQLRF HHEEECCCHHHHHHHHHCCCEECCCCEEEECCHHHHHHHHHCCCCEECCCCCCCCCCEEE KSPSGKIELYSATLEELLPGYGVPRVRDFALKKENELYFIQGKVAVHTNGATQYVPLLSE ECCCCCEEEHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHH LMWDNAVWVHPQTAQEKGIKTGDEIWLENATGKEKGKALVTPGIRPDTLFVYMGFGAKAG HHHCCEEEECCCHHHHCCCCCCCCEEEECCCCCCCCCEEECCCCCCCEEEEEECCCCCCC AKTAATTHGIHSGNLLPHVTSPVSGTVVHTAGVTLSRA CCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: May Bind 4Fe-4S Cluster. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751291; 11677609; 7737516 [H]