| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is wzxC [H]
Identifier: 29141271
GI number: 29141271
Start: 860502
End: 861980
Strand: Direct
Name: wzxC [H]
Synonym: t0770
Alternate gene names: 29141271
Gene position: 860502-861980 (Clockwise)
Preceding gene: 29141270
Following gene: 29141272
Centisome position: 17.96
GC content: 51.45
Gene sequence:
>1479_bases ATGAGTTTACGACAAAAAACGATCAGCGGCGTTAAATGGTCGGCTATCGCCACGATAGTGATTATCGGTCTGGGGTTAAT TCAGATGACGGTGCTGGCGCGGATCATCGACAACCACCAGTTTGGCCTGTTGACCGTATCGCTGGTGATTATCGCGCTGG CCGACACGATTTCGGACTTTGGCATCGCGAACTCGATTATCCAGCGTAAAACGATTGGGCATCTGGAGCTGACCACGCTT TACTGGCTAAACGTTGGGCTTGGGATTGTGGTATTTGCGGTGGTCTTTTGGCTGAGCGATGCGATTGCCCATGTTTTGCA TAACCCGGATCTCGCGCCGTTAATCAAAACGTTGTCGCTGGCGTTCATCGTGATCCCTCACGGGCAGCAGTTCCGCGCGC TGATGCAAAAAGAGCTGGAGTTCAATAAGATCGGCATGATCGAAACGACCTCCGTGCTGGCGGGGTTCACCTTTACGGTG ATTAGCGCCCATTACTGGCCGCTGGCGTTAACCGCGATTCTCGGCTATCTGGTGAACAGCGCGGTGCGAACGCTGCTGTT TGGTTACTTTGGCCGCAAGATTTACCGTCCGGGGCTGCATTTTTCGCTGGCATCGGTGTCCACGAACCTGCGTTTTGGCG CGTGGCTGACGGCGGACAGTATCGTCAATTACATCAACACGAATTTATCGACGCTGGTACTGGCGAGAATTCTCGGCGCA AGCGTCGCCGGGGGATATAACCTCGCGTACAACGTGGCTGTTGTGCCGCCGGCGAAGCTTAACCCCATCATTACTCGCGT GCTATTTCCGGCATTCGCCAAAATCCAGGACGATACCGAGAAGCTGCGCGTCAACTTCTATAAGTTGCTTTCCGTGGTGG GAATTATCAATTTTCCCGCGCTGTTGGGCCTGATGGTAGTGGCGAACAATTTTGTGCCGTTAGTGTTTGGTGAGAAGTGG AACAGCATTATCCCGATCCTGAAATTGCTGTGCGTTGTGGGGCTGCTGCGCTCAGTCGGCAACCCGATTGGTTCGCTGCT GATGGCGAAAGCGCGCGTGGATATCAGCTTTAAGTTCAACGTCTTTAAAACGTTTCTGTTTATCCCGGCAATTCTCATTG GCGGCCATCTGGCGGGGGCGATTGGCGTGACGCTGGGGTTCCTGGTGGTGCAAATCATCAACACCATTCTGAGCTATTTC GTGATGATTAAGCCGGTACTCGGCTCCAGCTACCGTCAGTATATTCTCAGCCTGTGGCTACCGTTTTATCTCTCATTGCC CACATTTATTACCAGCTACGGCGCAGGAAAGCTAGTCGACGGCTATTTACCGTTGTCAGGGGTATTCGCGCTACAGGTTG TGGTCGGTATTTTGAGTTTTATTTTAATGATTATTTTTTCACGCAATGCGCTGGTGATGGAAATTAAAAATCAGCTTGTT GGCAGTGAAAAAATGAAAAAGTTATTACGTGTCGGATGA
Upstream 100 bases:
>100_bases AACCTGACCCACAAGGCTATTTTACTTGCCATATTGCACCAGGGCAGTGCTCAATCTGGCTGCGCCAATGACGCCTTGTG AACAGGTTCTGGAGAAAAGA
Downstream 100 bases:
>100_bases CGAGGATATAAGAGGCTATTTATGAAATTATTAATTTTAGGCAACCACACATGCGGCAACCGTGGTGATAGCGCCATTAT GCGCGGTTTGCTTGATGCCA
Product: colanic acid exporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSLRQKTISGVKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLLTVSLVIIALADTISDFGIANSIIQRKTIGHLELTTL YWLNVGLGIVVFAVVFWLSDAIAHVLHNPDLAPLIKTLSLAFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTV ISAHYWPLALTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTADSIVNYINTNLSTLVLARILGA SVAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVANNFVPLVFGEKW NSIIPILKLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAILIGGHLAGAIGVTLGFLVVQIINTILSYF VMIKPVLGSSYRQYILSLWLPFYLSLPTFITSYGAGKLVDGYLPLSGVFALQVVVGILSFILMIIFSRNALVMEIKNQLV GSEKMKKLLRVG
Sequences:
>Translated_492_residues MSLRQKTISGVKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLLTVSLVIIALADTISDFGIANSIIQRKTIGHLELTTL YWLNVGLGIVVFAVVFWLSDAIAHVLHNPDLAPLIKTLSLAFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTV ISAHYWPLALTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTADSIVNYINTNLSTLVLARILGA SVAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVANNFVPLVFGEKW NSIIPILKLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAILIGGHLAGAIGVTLGFLVVQIINTILSYF VMIKPVLGSSYRQYILSLWLPFYLSLPTFITSYGAGKLVDGYLPLSGVFALQVVVGILSFILMIIFSRNALVMEIKNQLV GSEKMKKLLRVG >Mature_491_residues SLRQKTISGVKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLLTVSLVIIALADTISDFGIANSIIQRKTIGHLELTTLY WLNVGLGIVVFAVVFWLSDAIAHVLHNPDLAPLIKTLSLAFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTVI SAHYWPLALTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTADSIVNYINTNLSTLVLARILGAS VAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPALLGLMVVANNFVPLVFGEKWN SIIPILKLLCVVGLLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAILIGGHLAGAIGVTLGFLVVQIINTILSYFV MIKPVLGSSYRQYILSLWLPFYLSLPTFITSYGAGKLVDGYLPLSGVFALQVVVGILSFILMIIFSRNALVMEIKNQLVG SEKMKKLLRVG
Specific function: Lipopolysaccharide biosynthesis. [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788359, Length=492, Percent_Identity=85.5691056910569, Blast_Score=851, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 53883; Mature: 53752
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRQKTISGVKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLLTVSLVIIALADTISDF CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GIANSIIQRKTIGHLELTTLYWLNVGLGIVVFAVVFWLSDAIAHVLHNPDLAPLIKTLSL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTVISAHYWPLALTAILGYLVNS HEEEECCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTADSIVNYINTNLSTLVLARILGA HHHHHHHHHHHHHHCCCCCCEEHHHHCCCCEECEEECHHHHHHHHHCCHHHHHHHHHHHH SVAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPA HCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLGLMVVANNFVPLVFGEKWNSIIPILKLLCVVGLLRSVGNPIGSLLMAKARVDISFKFN HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEHH VFKTFLFIPAILIGGHLAGAIGVTLGFLVVQIINTILSYFVMIKPVLGSSYRQYILSLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH PFYLSLPTFITSYGAGKLVDGYLPLSGVFALQVVVGILSFILMIIFSRNALVMEIKNQLV HHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GSEKMKKLLRVG CHHHHHHHHCCC >Mature Secondary Structure SLRQKTISGVKWSAIATIVIIGLGLIQMTVLARIIDNHQFGLLTVSLVIIALADTISDF CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GIANSIIQRKTIGHLELTTLYWLNVGLGIVVFAVVFWLSDAIAHVLHNPDLAPLIKTLSL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AFIVIPHGQQFRALMQKELEFNKIGMIETTSVLAGFTFTVISAHYWPLALTAILGYLVNS HEEEECCCHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVRTLLFGYFGRKIYRPGLHFSLASVSTNLRFGAWLTADSIVNYINTNLSTLVLARILGA HHHHHHHHHHHHHHCCCCCCEEHHHHCCCCEECEEECHHHHHHHHHCCHHHHHHHHHHHH SVAGGYNLAYNVAVVPPAKLNPIITRVLFPAFAKIQDDTEKLRVNFYKLLSVVGIINFPA HCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLGLMVVANNFVPLVFGEKWNSIIPILKLLCVVGLLRSVGNPIGSLLMAKARVDISFKFN HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEEEHH VFKTFLFIPAILIGGHLAGAIGVTLGFLVVQIINTILSYFVMIKPVLGSSYRQYILSLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH PFYLSLPTFITSYGAGKLVDGYLPLSGVFALQVVVGILSFILMIIFSRNALVMEIKNQLV HHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GSEKMKKLLRVG CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8759852; 9097040; 9278503 [H]