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The map label for this gene is nudI [H]

Identifier: 29141083

GI number: 29141083

Start: 644093

End: 644518

Strand: Reverse

Name: nudI [H]

Synonym: t0568

Alternate gene names: 29141083

Gene position: 644518-644093 (Counterclockwise)

Preceding gene: 29141091

Following gene: 161486811

Centisome position: 13.45

GC content: 49.53

Gene sequence:

>426_bases
ATGCGTCAACGAACTATAGTTTGCCCATTAATTCAAAATGATGGCTGTTATCTGCTGTGCAAAATGGCCGACAACCGCGG
CGTCTTTCCCGGTCAGTGGGCGCTGTCGGGCGGCGGGGTCGAGCCAGGCGAACGTATTGAAGAGGCGCTGCGTCGGGAGA
TTCGGGAGGAACTCGGCGAACAACTGATTCTGAGCGATATTACGCCGTGGACCTTTCGCGACGATATCCGCGTTAAAACG
TACGCTGATGGCAGACAAGAAGAGATTTATATGATTTATCTCATCTTCGACTGTGTTTCCGCTAACCGCGATATATGTAT
TAACGACGAATTTCAGGACTACGCCTGGGTCAAGCCAGAAGAACTGGCGCTGTATGATTTGAATGTAGCGACACGCCACA
CATTAGCATTGAAAGGGTTATTATAA

Upstream 100 bases:

>100_bases
TAACAAAAAACGCAGTCTGCGTTATCGCTTCCATTTTTCACAAAGAATTTCGCAGAATGATTTGTTAAGCTGATGGCCTG
GTGGTTTAAGGAAGCGACTT

Downstream 100 bases:

>100_bases
TAACGACAGCCGCTTCAGGCTGTCTTTACGCTTTTAACATGCGGCTAGCCGGGAACAAATTCACCGTCTAAAAAGAGTTT
TCCGTTTTCCGCATACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRVKT
YADGRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPEELALYDLNVATRHTLALKGLL

Sequences:

>Translated_141_residues
MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRVKT
YADGRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPEELALYDLNVATRHTLALKGLL
>Mature_141_residues
MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGEQLILSDITPWTFRDDIRVKT
YADGRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPEELALYDLNVATRHTLALKGLL

Specific function: Catalyzes the hydrolysis of nucleoside triphosphates, with a preference for pyrimidine deoxynucleoside triphosphates (dUTP, dTTP and dCTP) [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788585, Length=141, Percent_Identity=87.2340425531915, Blast_Score=259, Evalue=4e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.-.- [C]

Molecular weight: Translated: 16288; Mature: 16288

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGE
CCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
QLILSDITPWTFRDDIRVKTYADGRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPE
HEEHHCCCCCEECCCEEEEEECCCCCCEEEEEEEEEEHHCCCCCEEECCCCCCCCCCCCC
ELALYDLNVATRHTLALKGLL
CEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEALRREIREELGE
CCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
QLILSDITPWTFRDDIRVKTYADGRQEEIYMIYLIFDCVSANRDICINDEFQDYAWVKPE
HEEHHCCCCCEECCCEEEEEECCCCCCEEEEEEEEEEHHCCCCCEEECCCCCCCCCCCCC
ELALYDLNVATRHTLALKGLL
CEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA