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The map label for this gene is ypfJ [H]

Identifier: 29140900

GI number: 29140900

Start: 442566

End: 443429

Strand: Direct

Name: ypfJ [H]

Synonym: t0373

Alternate gene names: 29140900

Gene position: 442566-443429 (Clockwise)

Preceding gene: 29140899

Following gene: 29140901

Centisome position: 9.24

GC content: 56.25

Gene sequence:

>864_bases
ATGCGCTGGCAAGGGCGTCGTGAAAGTAACAATGTAGAGGACAGACGTAATCGGCCAGGCGGCCCCTCGCTGGGTGGCCC
TGGCTTTCGTCTTCCGCGCGGGAAAGGCGGCATCATTCTGTTGGTGGTGGTGGTGGTCGCAGGGTACTATGGGGTGGATT
TAACCGGTCTGTTGACTGGTCAGCCGGTTTCGCAGCAGCAGTCGACGCGTTCGATAAGCCCCAATGATGATGAAGCGGCA
AAATTTACCTCGGTGATTCTGGCGACGACCGAAGATACCTGGGGGCAACTCTTTCAAAAAATGGGGCGCGGCTATCAGCA
GCCAAAACTGGTGATGTACCGTGGTATGACGCGTACCGGCTGTGGTGCGGGTCAGTCCGTGATGGGGCCGTTTTACTGCC
CGGCGGACGGCACCGTCTATATCGATCTCTCATTTTACGATGTTATGAAAAATAAGCTGGGCGCGGACGGTGATTTTGCC
CAGGGTTATGTTATCGCCCACGAAGTCGGCCACCACGTACAAAAACTGTTAGGCATTGAGCCGAAAGTACGCCAGTTACA
ACAAAACGCGTCGCAAACGGAGGTGAATCGCCTTTCGGTGCGCATGGAGCTACAGGCGGATTGCTTTGCCGGCGTGTGGG
GACACAGTATGCAGCAGCAAGGCGTACTGGAGGCGGGCGATCTGGAAGAGGCGCTCAATGCCGCACAGGCTATCGGCGAC
GATCGCTTACAGCAACAGGGGCAGGGGCGCGTGGTGCCGGATAGTTTTACCCACGGCACCTCAGAACAGCGCTACAGCTG
GTTTAAGCGTGGATTTGACAGCGGTGACCCGGCGCAATGTAATACGTTTGGTAAAAACTTTTGA

Upstream 100 bases:

>100_bases
CCGGTATCATCCTTTCCTCATTCTGATAGCGTTTACCTGTGGTAATCCTGCGCCTGACCGCCTACGATCATCTGTATAAC
AAAGAGAGAATGAGGTGATT

Downstream 100 bases:

>100_bases
TAAACTGGGGCAGGGATGTCTGATATCGATGCGCTACGGGCGTTAACGTCGCAAATGACACAGGAAGGCATTCGCCGTTT
ACTGGTCATCAGCGGCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRWQGRRESNNVEDRRNRPGGPSLGGPGFRLPRGKGGIILLVVVVVAGYYGVDLTGLLTGQPVSQQQSTRSISPNDDEAA
KFTSVILATTEDTWGQLFQKMGRGYQQPKLVMYRGMTRTGCGAGQSVMGPFYCPADGTVYIDLSFYDVMKNKLGADGDFA
QGYVIAHEVGHHVQKLLGIEPKVRQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQQQGVLEAGDLEEALNAAQAIGD
DRLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGDPAQCNTFGKNF

Sequences:

>Translated_287_residues
MRWQGRRESNNVEDRRNRPGGPSLGGPGFRLPRGKGGIILLVVVVVAGYYGVDLTGLLTGQPVSQQQSTRSISPNDDEAA
KFTSVILATTEDTWGQLFQKMGRGYQQPKLVMYRGMTRTGCGAGQSVMGPFYCPADGTVYIDLSFYDVMKNKLGADGDFA
QGYVIAHEVGHHVQKLLGIEPKVRQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQQQGVLEAGDLEEALNAAQAIGD
DRLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGDPAQCNTFGKNF
>Mature_287_residues
MRWQGRRESNNVEDRRNRPGGPSLGGPGFRLPRGKGGIILLVVVVVAGYYGVDLTGLLTGQPVSQQQSTRSISPNDDEAA
KFTSVILATTEDTWGQLFQKMGRGYQQPKLVMYRGMTRTGCGAGQSVMGPFYCPADGTVYIDLSFYDVMKNKLGADGDFA
QGYVIAHEVGHHVQKLLGIEPKVRQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQQQGVLEAGDLEEALNAAQAIGD
DRLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGDPAQCNTFGKNF

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=287, Percent_Identity=91.6376306620209, Blast_Score=533, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31485; Mature: 31485

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWQGRRESNNVEDRRNRPGGPSLGGPGFRLPRGKGGIILLVVVVVAGYYGVDLTGLLTG
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC
QPVSQQQSTRSISPNDDEAAKFTSVILATTEDTWGQLFQKMGRGYQQPKLVMYRGMTRTG
CCCCHHHHHCCCCCCCHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCCCC
CGAGQSVMGPFYCPADGTVYIDLSFYDVMKNKLGADGDFAQGYVIAHEVGHHVQKLLGIE
CCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PKVRQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQQQGVLEAGDLEEALNAAQAIGD
HHHHHHHHCCHHHHHHHHEEEEEECHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHCH
DRLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGDPAQCNTFGKNF
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWQGRRESNNVEDRRNRPGGPSLGGPGFRLPRGKGGIILLVVVVVAGYYGVDLTGLLTG
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECC
QPVSQQQSTRSISPNDDEAAKFTSVILATTEDTWGQLFQKMGRGYQQPKLVMYRGMTRTG
CCCCHHHHHCCCCCCCHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCCCC
CGAGQSVMGPFYCPADGTVYIDLSFYDVMKNKLGADGDFAQGYVIAHEVGHHVQKLLGIE
CCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
PKVRQLQQNASQTEVNRLSVRMELQADCFAGVWGHSMQQQGVLEAGDLEEALNAAQAIGD
HHHHHHHHCCHHHHHHHHEEEEEECHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHCH
DRLQQQGQGRVVPDSFTHGTSEQRYSWFKRGFDSGDPAQCNTFGKNF
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]