Click here to switch to the map view.

The map label for this gene is yfiP [H]

Identifier: 29140795

GI number: 29140795

Start: 299423

End: 300103

Strand: Reverse

Name: yfiP [H]

Synonym: t0260

Alternate gene names: 29140795

Gene position: 300103-299423 (Counterclockwise)

Preceding gene: 29140796

Following gene: 29140794

Centisome position: 6.26

GC content: 54.92

Gene sequence:

>681_bases
ATGACCAATAACGCTGTCCTTCAGTTACGCGCCGAACGGCTTGCGCGCGCTACTCGCCCTTTTCTTGCCAGAGGCAATCG
GGTTCGCCGCTGTCAACGCTGCCTGCTGCCGCTAAAATCTTGCCTGTGTGATACGTTAACGCCTTCTCAGGCGAAAAGCC
GTTTTTGTCTGGTCATGTTTGACACTGAACCGATGAAACCCAGCAATACCGGCCGGCTGATAGCCGATATTTTGCCAGAT
ACCGCGGCGTTTCAGTGGTCGCGTACCGAGCCGCCGCAGGCGTTGCTGGAGCTGGTACAGCATCCGGATTATCAGCCGAT
AGTGGTCTTTCCTGCGTCCTACGCCGGCGAAGCGCGCGAGGTCATTTCCACCCCGCCCGCCGGGAAACCGCCGCTGTTTA
TTATGCTGGACGGCACCTGGCCCGAAGCACGTAAAATGTTTCGTAAAAGCCCTTATCTGGATCATCTGCCGGTCATTTCC
GTCGATTTATCGCGTCTTTCAGCTTATCGTCTGCGTGAAATCCATGCCGAAGGGCAATATTGTACCGCCGAAGTCGCGAT
AGCGTTGTTAGATCTGGCGGGAGATCCCGAGGCGGCAACCAGTTTAGGTGAACATTTCATCCGTTTCAAAACGCGCTATC
TGGCAGGAAAAACGCAACATCCGGGAAACGTCACAGCATAA

Upstream 100 bases:

>100_bases
CGACAGCTGGCTGAACGAAGCGCTGTAAACGCCACGGGGCGCATCTTGTGCCCCGTTTTCACCTCTGCCACAATAGCGTT
TTTCTCCGCAAACGCTTTCT

Downstream 100 bases:

>100_bases
AATAGCGAAAGCGTTTAAAATTATCCGGTCACTTCTGTGTAAGGGAAACCGGTATGAGCCAGCAAGGACTGGAAGCGCTA
CTGCGACCAAAATCGATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTNNAVLQLRAERLARATRPFLARGNRVRRCQRCLLPLKSCLCDTLTPSQAKSRFCLVMFDTEPMKPSNTGRLIADILPD
TAAFQWSRTEPPQALLELVQHPDYQPIVVFPASYAGEAREVISTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPVIS
VDLSRLSAYRLREIHAEGQYCTAEVAIALLDLAGDPEAATSLGEHFIRFKTRYLAGKTQHPGNVTA

Sequences:

>Translated_226_residues
MTNNAVLQLRAERLARATRPFLARGNRVRRCQRCLLPLKSCLCDTLTPSQAKSRFCLVMFDTEPMKPSNTGRLIADILPD
TAAFQWSRTEPPQALLELVQHPDYQPIVVFPASYAGEAREVISTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPVIS
VDLSRLSAYRLREIHAEGQYCTAEVAIALLDLAGDPEAATSLGEHFIRFKTRYLAGKTQHPGNVTA
>Mature_225_residues
TNNAVLQLRAERLARATRPFLARGNRVRRCQRCLLPLKSCLCDTLTPSQAKSRFCLVMFDTEPMKPSNTGRLIADILPDT
AAFQWSRTEPPQALLELVQHPDYQPIVVFPASYAGEAREVISTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPVISV
DLSRLSAYRLREIHAEGQYCTAEVAIALLDLAGDPEAATSLGEHFIRFKTRYLAGKTQHPGNVTA

Specific function: Unknown

COG id: COG3148

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTW family [H]

Homologues:

Organism=Escherichia coli, GI87082133, Length=226, Percent_Identity=87.6106194690265, Blast_Score=411, Evalue=1e-116,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005636 [H]

Pfam domain/function: PF03942 DTW [H]

EC number: NA

Molecular weight: Translated: 25244; Mature: 25112

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNNAVLQLRAERLARATRPFLARGNRVRRCQRCLLPLKSCLCDTLTPSQAKSRFCLVMF
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
DTEPMKPSNTGRLIADILPDTAAFQWSRTEPPQALLELVQHPDYQPIVVFPASYAGEARE
CCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHH
VISTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPVISVDLSRLSAYRLREIHAEGQY
HHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCC
CTAEVAIALLDLAGDPEAATSLGEHFIRFKTRYLAGKTQHPGNVTA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TNNAVLQLRAERLARATRPFLARGNRVRRCQRCLLPLKSCLCDTLTPSQAKSRFCLVMF
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
DTEPMKPSNTGRLIADILPDTAAFQWSRTEPPQALLELVQHPDYQPIVVFPASYAGEARE
CCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHH
VISTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDHLPVISVDLSRLSAYRLREIHAEGQY
HHCCCCCCCCCEEEEEECCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCC
CTAEVAIALLDLAGDPEAATSLGEHFIRFKTRYLAGKTQHPGNVTA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]