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The map label for this gene is yefC [C]

Identifier: 28563907

GI number: 28563907

Start: 464517

End: 464990

Strand: Direct

Name: yefC [C]

Synonym: OB0437

Alternate gene names: 28563907

Gene position: 464517-464990 (Clockwise)

Preceding gene: 23097891

Following gene: 23097893

Centisome position: 12.79

GC content: 36.92

Gene sequence:

>474_bases
ATGGAAATATGGGATTTATATGATATAGATCGAAATAAAATAGGGAAGACGCATGAAAGAGGAATGGAGATGCCTGAGGG
TTGTTTTCATCTTGTGGTTCGTGCTTGGGTAAAAAATGATAAAGATGAAATTTTGTTATCAAAACGACATCCAAACAAGC
CCTTTGGAGGGTACTGGGAGAACACAGGAGGCTCAGCTATTCAAGGTGAAAATAGTATCCAAGCGGTATTAAGGGAAGTG
TCAGAGGAAATAGGGCTGCAATTAGATTCAGAAGAAGGGAAGTTAATTCTTCAACAGACTAAAAATGTCTCGCATCAAGA
TATTTGGTTATTTCGTTCGAACGTAGCTATTGAAGAGTTATCCTTTCAAGAAGATGAAGTTGTTGATGCCATGTGGGTCA
ACAAAGATAAATATGATGAAATGCAAAATAAAGGTTTAATTGTTCCTACCATTTCAATGTTTTCAGCTTGGTAG

Upstream 100 bases:

>100_bases
TTAGCCAAACATCATAATAATACTACATCAAAGAGGAACCACCTAGAAAAACAACTAGAAAGTAAATAACTATATTACTA
AAGTAAGGTGGTTCAATCTA

Downstream 100 bases:

>100_bases
GATAAACCATACATCTGAAGTTGTAGAAAATGCTACTGTCCTAGTAGCATTTTTTTGTGCTATAAAATCGGTCCATCAGC
CGACTACGAAAATGTCCTGA

Product: mutator MutT protein

Products: GDP; mannose [C]

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MEIWDLYDIDRNKIGKTHERGMEMPEGCFHLVVRAWVKNDKDEILLSKRHPNKPFGGYWENTGGSAIQGENSIQAVLREV
SEEIGLQLDSEEGKLILQQTKNVSHQDIWLFRSNVAIEELSFQEDEVVDAMWVNKDKYDEMQNKGLIVPTISMFSAW

Sequences:

>Translated_157_residues
MEIWDLYDIDRNKIGKTHERGMEMPEGCFHLVVRAWVKNDKDEILLSKRHPNKPFGGYWENTGGSAIQGENSIQAVLREV
SEEIGLQLDSEEGKLILQQTKNVSHQDIWLFRSNVAIEELSFQEDEVVDAMWVNKDKYDEMQNKGLIVPTISMFSAW
>Mature_157_residues
MEIWDLYDIDRNKIGKTHERGMEMPEGCFHLVVRAWVKNDKDEILLSKRHPNKPFGGYWENTGGSAIQGENSIQAVLREV
SEEIGLQLDSEEGKLILQQTKNVSHQDIWLFRSNVAIEELSFQEDEVVDAMWVNKDKYDEMQNKGLIVPTISMFSAW

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 18184; Mature: 18184

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIWDLYDIDRNKIGKTHERGMEMPEGCFHLVVRAWVKNDKDEILLSKRHPNKPFGGYWE
CCCCCCCCCCCHHCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCC
NTGGSAIQGENSIQAVLREVSEEIGLQLDSEEGKLILQQTKNVSHQDIWLFRSNVAIEEL
CCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEEEHHCCCCCCEEEEEECCCCHHHH
SFQEDEVVDAMWVNKDKYDEMQNKGLIVPTISMFSAW
CCCCHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHCCC
>Mature Secondary Structure
MEIWDLYDIDRNKIGKTHERGMEMPEGCFHLVVRAWVKNDKDEILLSKRHPNKPFGGYWE
CCCCCCCCCCCHHCCCCHHHCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCC
NTGGSAIQGENSIQAVLREVSEEIGLQLDSEEGKLILQQTKNVSHQDIWLFRSNVAIEEL
CCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEEEHHCCCCCCEEEEEECCCCHHHH
SFQEDEVVDAMWVNKDKYDEMQNKGLIVPTISMFSAW
CCCCHHHHHHHHCCCCHHHHHHCCCEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDP-mannose; H2O [C]

Specific reaction: GDP-mannose + H2O = GDP + mannose [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]