| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is pts16ABC [H]
Identifier: 28378719
GI number: 28378719
Start: 1889787
End: 1891754
Strand: Direct
Name: pts16ABC [H]
Synonym: lp_2097
Alternate gene names: 28378719
Gene position: 1889787-1891754 (Clockwise)
Preceding gene: 28378718
Following gene: 28378720
Centisome position: 57.12
GC content: 49.39
Gene sequence:
>1968_bases ATGGATATCCGCGATTTATTACTAAAAGATGTCATGATCATGGACATGCACGCCACGACCAAGGACGAAGCGATTGATGA GTTAGTTCATAAATATGCCGAACAAGGTATCATCAATGATGAGGCCCTCTACAAGCAAGACATCATCAAACGGGAAGCCG AATCAACTACCGGGATTGGCGACGGGATTGCTATGCCCCATGCCAAAGATAAGGCTGTTAACCGGGCAACCGTGATGTTT GCTAAGAGTAAGGCCGGCGTTGACTTCAACGCGTTAGATGGTCAACCCGTTCATCTTTTCTTCATGATTGCTGCTCCTGA AGGTGCCAACAACACCCATTTAGCCGCCCTCGCCGCCCTCTCAAGCTTATTGATTGATCCTGAATTGGTCGCTAAACTTA AGAATGCACAGTCACCTGAAGAAGTTCAACAACTCTTCGGTGATGCCCAGGCTGCTAAGGAAGAAAAGGAAGCCAAAGAT GCAGCTGCCAAGGCCGAAAAAGAAGCCGCAGCTGCCAGCACCACCACTGACGAAAAACGTCCCTATTTAGTTGGGGTTAC CGCCTGTCCAAACGGAATCGCCCATACTTACATGGCCGAAGCAGCCTTGATCAAAGCCGGTGAAGCGGCCGGTGTTGACA TCAAAATCGAAACGAATGGTTCTGAAGGTGTTAAGCACTTATTGACTGCCGATGAAATCGCTCGTGCCGACGGTGTTGTG ATCGCCGCTGACAAAAAGGTCAAGATGGCCCGTTTTGATGGTAAGCACCTGGTTAACCGTCCCGTTACTGACGGGATCAA CAACGCCGATCAATTAGTTCAAGAAGCCTTGAGCGGTAAAGCTCCTGTCTATCACGATGCTGATGGTGGTGCTGCGGATG ACGATGAAGGTGGCAGCGCTAATGGTAGCGTTTGGGGTGAAGTTTACAAAGACCTCATGAACGGGATTTCCCACATGTTG CCATTCGTTGTTGGTGGTGGGATCTTAATGGCCCTCTCCTTCATTATTGAGCAATTCGTTGGTAGTAAGAGCTTAGCCTT TACCTTCTTCAACCAAGCTGGTAACATGGCTTTCGCCTTCATGGTACCTGTTTTAGCCGGTTACATCGCCGAATCAATTG GTGATCGTCCTGCTTTGATGCCCGGGTTCGTTGGTGGGTTCATGGCCACGGTTTACACTGGCGCTTACGGTGGTGTTTAC ACGGCCTCCATTACCGCCAATGCTAAGAGTCCCGCTGGTTTCTTAGGTGGTTTAGCCGCTGGTTTCTTAGCCGGTTATAT TACTGTTTGGATGAAGAAGTGGACCAAGAACATGCCACAATCCTTAGACGGGATGAAGCCAATGCTGATCTTCCCAATTC TGGGCTTATTGATTATTGCTGCGCTAATGTTCTTCGTTGTTAACCCAATCTTCTCAGTTATCAACGCCTGGATTACCCAC TTCCTAAACTCAATGGGTACTGGTAATGCCGTTCTCCTCGGGCTTGTCCTCGGTGGTATGATGTCGATCGATATGGGTGG TCCTTTCAACAAGGCCGCTTACGTCTTCGCAACTGGTGCCTTTACCGCAACTGGACATGGGAACTTAATGGCCGCTGTTA TGGCTGGTGGGATGGTTCCACCATTGGCAACTGCGATTGCAACTGCCTTCTGGCCAAAGAAGTTTACGGATGACGAACGT AAAGCTGGTATCTCTAACTGGTTACTTGGTATTTCCTTCATTACTGAAGGTGCCATTCCATTCGCCACAGCTGACCCATT GCACGTTATCGGTTCAAGTGTGATTGGTGCTGCCATCGCCGGTGGTTTAACTCAACTTTGGGGCGTTGCCGTCCCTGCTC CTCATGGTGGCCTCTGGGTCTCATTACTCGCCACGAATATCTGGGGCTACATCGGTGCCACAATTATCGGTGCCGTTATC GCTGGGGTTATCCTTGGTCTCTGGAAACCAGCTAAAGCTTCTAAATAA
Upstream 100 bases:
>100_bases CTTCTCAGAAGACATTGCGACCCGCGCCAAGATCGATGAAATTTTGCCACTCATTAACATTGAAAAACTCGCTCACTAAA GAAAGGACTGTTAACTAAAC
Downstream 100 bases:
>100_bases TGTGATATCTAAAAAGACGATCAAATTGATCGTCTTTTTTTGTTTTCAAAATTAACGAATCAGCCGTCTAACCCCGCAAT AAAACGGGTATAATGAAAGT
Product: fructose PTS, EIIABC
Products: NA
Alternate protein names: EIIABC-Fru; Fructose-specific phosphotransferase enzyme IIA component; EII-Fru; PTS system fructose-specific EIIA component; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MDIRDLLLKDVMIMDMHATTKDEAIDELVHKYAEQGIINDEALYKQDIIKREAESTTGIGDGIAMPHAKDKAVNRATVMF AKSKAGVDFNALDGQPVHLFFMIAAPEGANNTHLAALAALSSLLIDPELVAKLKNAQSPEEVQQLFGDAQAAKEEKEAKD AAAKAEKEAAAASTTTDEKRPYLVGVTACPNGIAHTYMAEAALIKAGEAAGVDIKIETNGSEGVKHLLTADEIARADGVV IAADKKVKMARFDGKHLVNRPVTDGINNADQLVQEALSGKAPVYHDADGGAADDDEGGSANGSVWGEVYKDLMNGISHML PFVVGGGILMALSFIIEQFVGSKSLAFTFFNQAGNMAFAFMVPVLAGYIAESIGDRPALMPGFVGGFMATVYTGAYGGVY TASITANAKSPAGFLGGLAAGFLAGYITVWMKKWTKNMPQSLDGMKPMLIFPILGLLIIAALMFFVVNPIFSVINAWITH FLNSMGTGNAVLLGLVLGGMMSIDMGGPFNKAAYVFATGAFTATGHGNLMAAVMAGGMVPPLATAIATAFWPKKFTDDER KAGISNWLLGISFITEGAIPFATADPLHVIGSSVIGAAIAGGLTQLWGVAVPAPHGGLWVSLLATNIWGYIGATIIGAVI AGVILGLWKPAKASK
Sequences:
>Translated_655_residues MDIRDLLLKDVMIMDMHATTKDEAIDELVHKYAEQGIINDEALYKQDIIKREAESTTGIGDGIAMPHAKDKAVNRATVMF AKSKAGVDFNALDGQPVHLFFMIAAPEGANNTHLAALAALSSLLIDPELVAKLKNAQSPEEVQQLFGDAQAAKEEKEAKD AAAKAEKEAAAASTTTDEKRPYLVGVTACPNGIAHTYMAEAALIKAGEAAGVDIKIETNGSEGVKHLLTADEIARADGVV IAADKKVKMARFDGKHLVNRPVTDGINNADQLVQEALSGKAPVYHDADGGAADDDEGGSANGSVWGEVYKDLMNGISHML PFVVGGGILMALSFIIEQFVGSKSLAFTFFNQAGNMAFAFMVPVLAGYIAESIGDRPALMPGFVGGFMATVYTGAYGGVY TASITANAKSPAGFLGGLAAGFLAGYITVWMKKWTKNMPQSLDGMKPMLIFPILGLLIIAALMFFVVNPIFSVINAWITH FLNSMGTGNAVLLGLVLGGMMSIDMGGPFNKAAYVFATGAFTATGHGNLMAAVMAGGMVPPLATAIATAFWPKKFTDDER KAGISNWLLGISFITEGAIPFATADPLHVIGSSVIGAAIAGGLTQLWGVAVPAPHGGLWVSLLATNIWGYIGATIIGAVI AGVILGLWKPAKASK >Mature_655_residues MDIRDLLLKDVMIMDMHATTKDEAIDELVHKYAEQGIINDEALYKQDIIKREAESTTGIGDGIAMPHAKDKAVNRATVMF AKSKAGVDFNALDGQPVHLFFMIAAPEGANNTHLAALAALSSLLIDPELVAKLKNAQSPEEVQQLFGDAQAAKEEKEAKD AAAKAEKEAAAASTTTDEKRPYLVGVTACPNGIAHTYMAEAALIKAGEAAGVDIKIETNGSEGVKHLLTADEIARADGVV IAADKKVKMARFDGKHLVNRPVTDGINNADQLVQEALSGKAPVYHDADGGAADDDEGGSANGSVWGEVYKDLMNGISHML PFVVGGGILMALSFIIEQFVGSKSLAFTFFNQAGNMAFAFMVPVLAGYIAESIGDRPALMPGFVGGFMATVYTGAYGGVY TASITANAKSPAGFLGGLAAGFLAGYITVWMKKWTKNMPQSLDGMKPMLIFPILGLLIIAALMFFVVNPIFSVINAWITH FLNSMGTGNAVLLGLVLGGMMSIDMGGPFNKAAYVFATGAFTATGHGNLMAAVMAGGMVPPLATAIATAFWPKKFTDDER KAGISNWLLGISFITEGAIPFATADPLHVIGSSVIGAAIAGGLTQLWGVAVPAPHGGLWVSLLATNIWGYIGATIIGAVI AGVILGLWKPAKASK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=472, Percent_Identity=40.8898305084746, Blast_Score=332, Evalue=6e-92, Organism=Escherichia coli, GI1786951, Length=671, Percent_Identity=32.6378539493294, Blast_Score=330, Evalue=1e-91, Organism=Escherichia coli, GI87082348, Length=456, Percent_Identity=32.4561403508772, Blast_Score=224, Evalue=2e-59, Organism=Escherichia coli, GI1790386, Length=329, Percent_Identity=34.9544072948328, Blast_Score=156, Evalue=3e-39, Organism=Escherichia coli, GI1788729, Length=395, Percent_Identity=29.873417721519, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1789597, Length=141, Percent_Identity=31.9148936170213, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790387, Length=94, Percent_Identity=42.5531914893617, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788730, Length=94, Percent_Identity=37.2340425531915, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI2367327, Length=107, Percent_Identity=26.1682242990654, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR004715 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF00359 PTS_EIIA_2; PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 68565; Mature: 68565
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS00372 PTS_EIIA_TYPE_2_HIS ; PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRDLLLKDVMIMDMHATTKDEAIDELVHKYAEQGIINDEALYKQDIIKREAESTTGIG CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC DGIAMPHAKDKAVNRATVMFAKSKAGVDFNALDGQPVHLFFMIAAPEGANNTHLAALAAL CCCCCCCCHHHHCCHHEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCCHHHHHHHHH SSLLIDPELVAKLKNAQSPEEVQQLFGDAQAAKEEKEAKDAAAKAEKEAAAASTTTDEKR HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PYLVGVTACPNGIAHTYMAEAALIKAGEAAGVDIKIETNGSEGVKHLLTADEIARADGVV CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEE IAADKKVKMARFDGKHLVNRPVTDGINNADQLVQEALSGKAPVYHDADGGAADDDEGGSA EEECCCEEEHHCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC NGSVWGEVYKDLMNGISHMLPFVVGGGILMALSFIIEQFVGSKSLAFTFFNQAGNMAFAF CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH MVPVLAGYIAESIGDRPALMPGFVGGFMATVYTGAYGGVYTASITANAKSPAGFLGGLAA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHH GFLAGYITVWMKKWTKNMPQSLDGMKPMLIFPILGLLIIAALMFFVVNPIFSVINAWITH HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNSMGTGNAVLLGLVLGGMMSIDMGGPFNKAAYVFATGAFTATGHGNLMAAVMAGGMVP HHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCEEECCCCHHHHHHHHCCCCH PLATAIATAFWPKKFTDDERKAGISNWLLGISFITEGAIPFATADPLHVIGSSVIGAAIA HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GGLTQLWGVAVPAPHGGLWVSLLATNIWGYIGATIIGAVIAGVILGLWKPAKASK HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDIRDLLLKDVMIMDMHATTKDEAIDELVHKYAEQGIINDEALYKQDIIKREAESTTGIG CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC DGIAMPHAKDKAVNRATVMFAKSKAGVDFNALDGQPVHLFFMIAAPEGANNTHLAALAAL CCCCCCCCHHHHCCHHEEEEEECCCCCCEECCCCCCEEEEEEEECCCCCCCHHHHHHHHH SSLLIDPELVAKLKNAQSPEEVQQLFGDAQAAKEEKEAKDAAAKAEKEAAAASTTTDEKR HHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC PYLVGVTACPNGIAHTYMAEAALIKAGEAAGVDIKIETNGSEGVKHLLTADEIARADGVV CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEE IAADKKVKMARFDGKHLVNRPVTDGINNADQLVQEALSGKAPVYHDADGGAADDDEGGSA EEECCCEEEHHCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC NGSVWGEVYKDLMNGISHMLPFVVGGGILMALSFIIEQFVGSKSLAFTFFNQAGNMAFAF CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH MVPVLAGYIAESIGDRPALMPGFVGGFMATVYTGAYGGVYTASITANAKSPAGFLGGLAA HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHH GFLAGYITVWMKKWTKNMPQSLDGMKPMLIFPILGLLIIAALMFFVVNPIFSVINAWITH HHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLNSMGTGNAVLLGLVLGGMMSIDMGGPFNKAAYVFATGAFTATGHGNLMAAVMAGGMVP HHHHCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCEEECCCCHHHHHHHHCCCCH PLATAIATAFWPKKFTDDERKAGISNWLLGISFITEGAIPFATADPLHVIGSSVIGAAIA HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH GGLTQLWGVAVPAPHGGLWVSLLATNIWGYIGATIIGAVIAGVILGLWKPAKASK HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]