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The map label for this gene is ycdQ [C]

Identifier: 28378492

GI number: 28378492

Start: 1650581

End: 1651888

Strand: Direct

Name: ycdQ [C]

Synonym: lp_1824

Alternate gene names: 28378492

Gene position: 1650581-1651888 (Clockwise)

Preceding gene: 28378490

Following gene: 28378493

Centisome position: 49.89

GC content: 46.56

Gene sequence:

>1308_bases
ATGATGATAATAATCAGAGTTGCAATTATGATTTCAGTTGTTTTTTACTTGTATTTTATTATTAACTTATTGTTGATCAA
TCACTATCGGGAGCCCATTCAAAGCTATGAAAAAGGGCCCACACCCTATGAATTATTTTTGGTCATTCCGGTGCTCAATG
AAGAACACGTGATCTCGCGCACGATTACGCAACTTACTGAATCACTCGAACAATTACCACCAACCGTTCACGCCCAGATC
ATTGCCGTCGATGACGATTCGACTGATCACAGTCTACTGTTGTTAACTCAGTCATCGTCGCGCTTCTTACAAATCCTACA
CCGCACGGGCAACCAGCGTGCAGGTAAGGGGGCCGTCCTCAACACTGCCGTCCAGTATATTCATAAGACGTTAGCGCTAA
AATCTGATCCGCAACGGACGATCGTGGGGGTCCTAGATGCAGACGCATTCATGAATACTGCTGACTTGACACGGGTGCTG
GCGCACTTTGAACAAGAACCACAGTTGGCGATGATCCAAACTAGTGTGAACATTTATAATCAGCCCAACTGGCTGACCAA
GATGCAAAATTTTGAGTTTATGGGCGTTAACAATGCCACTCAACAGCTACGCAACCGTCTTGGTCAGGGGATCGCGTCGG
GTAATGGTCAGTTTGTCCGGCTAGATTTAGCGTTGCAAAACCCATGGGGGAATAGCTTACTTGAGGATCTCGAATTTACT
TTGCGGACTTGGCTGTTAGGTGGCACCCGAACAGCTTTTGATCATACATTAGTTGTCCAGCAAGAAGCTGTTGAACAATT
ACGACCGTTTTTTCGCCAACGGGTACGCTGGTGTCAGGGTGCCGTTCAATGTATGCGTTATCTACCAGCACTTTGGCGTT
CGGGACGTCTGAACCATTTTCAAAAATTGGACACGACCTTTTGGATTTTGATGCCTATCAGTGGTTGTATCGTGCCACTG
ACCAGTCTAATCACGTTAGTCGTGCTTGTGAGCCGTAGCCTACAACATTGGCAAGTTGGGTGGCATCACTTGGCTATCGG
GACATTACTGGTGATTGCTTTTTCGGCTTGCTTGGTATTAGCAGCACTGTATCAACGCAACTGTGCCGTCGTGAAACAAC
CCGTTGGCTTCTTAGATGCTCTCAAGCAGAGTTTAACCTTTCAAGCATTCCTATTGATCATTAGCCTGACGCCATACGTC
GCCATTTACCGACAGTTACGTGGTCAAACGGGGTGGGCCAAAACGCACCATGGTGTTACGACCCGCGTTGCAAAATATCC
AGATACTGGCTTAAAACGCTCATATTGA

Upstream 100 bases:

>100_bases
ATAGGCATGATTCGTTCACTATGTTTTCATAACATAAATAATAGGCATTTTAAAAAAGTATGCGTATAATACCTTCTTAA
TAAGTTTCGATGGGGGAGTT

Downstream 100 bases:

>100_bases
GATGAAGGTGCATGCCGATGAAGTGGTGCTATAAGATATTTCAAATTACCGTTCTCACGATTGCAGCTGCCTTACTCGGG
TGGATGATTGTCGCCAACTG

Product: glycosyltransferase (putative)

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyltransferase; Family 2 Glycosyltransferase

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MMIIIRVAIMISVVFYLYFIINLLLINHYREPIQSYEKGPTPYELFLVIPVLNEEHVISRTITQLTESLEQLPPTVHAQI
IAVDDDSTDHSLLLLTQSSSRFLQILHRTGNQRAGKGAVLNTAVQYIHKTLALKSDPQRTIVGVLDADAFMNTADLTRVL
AHFEQEPQLAMIQTSVNIYNQPNWLTKMQNFEFMGVNNATQQLRNRLGQGIASGNGQFVRLDLALQNPWGNSLLEDLEFT
LRTWLLGGTRTAFDHTLVVQQEAVEQLRPFFRQRVRWCQGAVQCMRYLPALWRSGRLNHFQKLDTTFWILMPISGCIVPL
TSLITLVVLVSRSLQHWQVGWHHLAIGTLLVIAFSACLVLAALYQRNCAVVKQPVGFLDALKQSLTFQAFLLIISLTPYV
AIYRQLRGQTGWAKTHHGVTTRVAKYPDTGLKRSY

Sequences:

>Translated_435_residues
MMIIIRVAIMISVVFYLYFIINLLLINHYREPIQSYEKGPTPYELFLVIPVLNEEHVISRTITQLTESLEQLPPTVHAQI
IAVDDDSTDHSLLLLTQSSSRFLQILHRTGNQRAGKGAVLNTAVQYIHKTLALKSDPQRTIVGVLDADAFMNTADLTRVL
AHFEQEPQLAMIQTSVNIYNQPNWLTKMQNFEFMGVNNATQQLRNRLGQGIASGNGQFVRLDLALQNPWGNSLLEDLEFT
LRTWLLGGTRTAFDHTLVVQQEAVEQLRPFFRQRVRWCQGAVQCMRYLPALWRSGRLNHFQKLDTTFWILMPISGCIVPL
TSLITLVVLVSRSLQHWQVGWHHLAIGTLLVIAFSACLVLAALYQRNCAVVKQPVGFLDALKQSLTFQAFLLIISLTPYV
AIYRQLRGQTGWAKTHHGVTTRVAKYPDTGLKRSY
>Mature_435_residues
MMIIIRVAIMISVVFYLYFIINLLLINHYREPIQSYEKGPTPYELFLVIPVLNEEHVISRTITQLTESLEQLPPTVHAQI
IAVDDDSTDHSLLLLTQSSSRFLQILHRTGNQRAGKGAVLNTAVQYIHKTLALKSDPQRTIVGVLDADAFMNTADLTRVL
AHFEQEPQLAMIQTSVNIYNQPNWLTKMQNFEFMGVNNATQQLRNRLGQGIASGNGQFVRLDLALQNPWGNSLLEDLEFT
LRTWLLGGTRTAFDHTLVVQQEAVEQLRPFFRQRVRWCQGAVQCMRYLPALWRSGRLNHFQKLDTTFWILMPISGCIVPL
TSLITLVVLVSRSLQHWQVGWHHLAIGTLLVIAFSACLVLAALYQRNCAVVKQPVGFLDALKQSLTFQAFLLIISLTPYV
AIYRQLRGQTGWAKTHHGVTTRVAKYPDTGLKRSY

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787259, Length=338, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49431; Mature: 49431

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIIIRVAIMISVVFYLYFIINLLLINHYREPIQSYEKGPTPYELFLVIPVLNEEHVISR
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHH
TITQLTESLEQLPPTVHAQIIAVDDDSTDHSLLLLTQSSSRFLQILHRTGNQRAGKGAVL
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHH
NTAVQYIHKTLALKSDPQRTIVGVLDADAFMNTADLTRVLAHFEQEPQLAMIQTSVNIYN
HHHHHHHHHHHHCCCCCCHHEEEEECHHHHCCHHHHHHHHHHHCCCCCEEEEEECHHHCC
QPNWLTKMQNFEFMGVNNATQQLRNRLGQGIASGNGQFVRLDLALQNPWGNSLLEDLEFT
CCHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
LRTWLLGGTRTAFDHTLVVQQEAVEQLRPFFRQRVRWCQGAVQCMRYLPALWRSGRLNHF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QKLDTTFWILMPISGCIVPLTSLITLVVLVSRSLQHWQVGWHHLAIGTLLVIAFSACLVL
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALYQRNCAVVKQPVGFLDALKQSLTFQAFLLIISLTPYVAIYRQLRGQTGWAKTHHGVT
HHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
TRVAKYPDTGLKRSY
HHHHCCCCCCCCCCC
>Mature Secondary Structure
MMIIIRVAIMISVVFYLYFIINLLLINHYREPIQSYEKGPTPYELFLVIPVLNEEHVISR
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHH
TITQLTESLEQLPPTVHAQIIAVDDDSTDHSLLLLTQSSSRFLQILHRTGNQRAGKGAVL
HHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHH
NTAVQYIHKTLALKSDPQRTIVGVLDADAFMNTADLTRVLAHFEQEPQLAMIQTSVNIYN
HHHHHHHHHHHHCCCCCCHHEEEEECHHHHCCHHHHHHHHHHHCCCCCEEEEEECHHHCC
QPNWLTKMQNFEFMGVNNATQQLRNRLGQGIASGNGQFVRLDLALQNPWGNSLLEDLEFT
CCHHHHHHCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
LRTWLLGGTRTAFDHTLVVQQEAVEQLRPFFRQRVRWCQGAVQCMRYLPALWRSGRLNHF
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QKLDTTFWILMPISGCIVPLTSLITLVVLVSRSLQHWQVGWHHLAIGTLLVIAFSACLVL
HHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALYQRNCAVVKQPVGFLDALKQSLTFQAFLLIISLTPYVAIYRQLRGQTGWAKTHHGVT
HHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
TRVAKYPDTGLKRSY
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA