Definition | Lactobacillus plantarum WCFS1, complete genome. |
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Accession | NC_004567 |
Length | 3,308,274 |
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The map label for this gene is pgm5 [H]
Identifier: 28378458
GI number: 28378458
Start: 1618383
End: 1618982
Strand: Direct
Name: pgm5 [H]
Synonym: lp_1785
Alternate gene names: 28378458
Gene position: 1618383-1618982 (Clockwise)
Preceding gene: 28378457
Following gene: 28378463
Centisome position: 48.92
GC content: 48.0
Gene sequence:
>600_bases TTGGCAAAGACATTATATATGATGCGGCATGGTGAAACACTTTTTAATCGGCTGAAGAAGATTCAGGGGGCGTGTGACTC GCCGCTAACCCCCAAAGGAATTGCGGATGCCCAACGCGTGGGTGCGTATTTTCAGGCGCAAGGGATTACGTTTGATCATG CGTACAGCTCAACGCAGGAACGAGCTAGTGACACGTTAGAATTAGTGACCAAGCAACCTTATGAGCGTTTAAAGGGTATC AAAGAGTGGAATTTTGGCGTTTTCGAAGGTGAGTCGGAAGTGTTAAATCCAAAACCGGACCCCGTGCGCCGCAGTCATGG TGACTTTTTCTGTCAGTACGGTGGCGAAAGTGATTTGCAGGTACAAGACCGCGTTGTCAAAACGTTGACGGCGGTGATGG CACGTCCGGATCATCATCAGGTGTTGGTGGTCAGTCACGGTGGGGCTAGCTTCATGTTTTTGCGGCAATGGCTTTCAATG GACGAAATTGAGCGGCAAGGCATCGTGTTACATAACTGTGCAGTCATCAAGTACCAGTATGACGCGGGCCGCTTCACATT TGAAAAAATCATTAATTTGGCTGCAACTGATAAAAATTAA
Upstream 100 bases:
>100_bases CAAAAGTAGGCTCTAACTGGCCAATGTATAGGACGCTTTAAATAGCGCTTTCATTTATGGTATGCTTATCTAAAGACAAA TTAAAGGCAGGTTAGTTAAA
Downstream 100 bases:
>100_bases AATTATGTCAACTAGATTTAAGTGCGTTGACACTCAGTCTGAGTTTAAGCATTAAAAAGCGCTCACGACTCGGATTCAGG CATGAAAGCGGGGTCGTGAA
Product: phosphoglycerate mutase (putative)
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MAKTLYMMRHGETLFNRLKKIQGACDSPLTPKGIADAQRVGAYFQAQGITFDHAYSSTQERASDTLELVTKQPYERLKGI KEWNFGVFEGESEVLNPKPDPVRRSHGDFFCQYGGESDLQVQDRVVKTLTAVMARPDHHQVLVVSHGGASFMFLRQWLSM DEIERQGIVLHNCAVIKYQYDAGRFTFEKIINLAATDKN
Sequences:
>Translated_199_residues MAKTLYMMRHGETLFNRLKKIQGACDSPLTPKGIADAQRVGAYFQAQGITFDHAYSSTQERASDTLELVTKQPYERLKGI KEWNFGVFEGESEVLNPKPDPVRRSHGDFFCQYGGESDLQVQDRVVKTLTAVMARPDHHQVLVVSHGGASFMFLRQWLSM DEIERQGIVLHNCAVIKYQYDAGRFTFEKIINLAATDKN >Mature_198_residues AKTLYMMRHGETLFNRLKKIQGACDSPLTPKGIADAQRVGAYFQAQGITFDHAYSSTQERASDTLELVTKQPYERLKGIK EWNFGVFEGESEVLNPKPDPVRRSHGDFFCQYGGESDLQVQDRVVKTLTAVMARPDHHQVLVVSHGGASFMFLRQWLSMD EIERQGIVLHNCAVIKYQYDAGRFTFEKIINLAATDKN
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=183, Percent_Identity=30.6010928961749, Blast_Score=68, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6324857, Length=200, Percent_Identity=30.5, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 22590; Mature: 22459
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTLYMMRHGETLFNRLKKIQGACDSPLTPKGIADAQRVGAYFQAQGITFDHAYSSTQE CCCEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCEEHHHHCCHHH RASDTLELVTKQPYERLKGIKEWNFGVFEGESEVLNPKPDPVRRSHGDFFCQYGGESDLQ HHHHHHHHHHCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCH VQDRVVKTLTAVMARPDHHQVLVVSHGGASFMFLRQWLSMDEIERQGIVLHNCAVIKYQY HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHCCEEEEEEEEEEEEC DAGRFTFEKIINLAATDKN CCCCEEHHHHHHHHCCCCC >Mature Secondary Structure AKTLYMMRHGETLFNRLKKIQGACDSPLTPKGIADAQRVGAYFQAQGITFDHAYSSTQE CCEEEHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHEECCCEEHHHHCCHHH RASDTLELVTKQPYERLKGIKEWNFGVFEGESEVLNPKPDPVRRSHGDFFCQYGGESDLQ HHHHHHHHHHCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCH VQDRVVKTLTAVMARPDHHQVLVVSHGGASFMFLRQWLSMDEIERQGIVLHNCAVIKYQY HHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCHHHHHHCCEEEEEEEEEEEEC DAGRFTFEKIINLAATDKN CCCCEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA