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The map label for this gene is ybbR [H]

Identifier: 28377669

GI number: 28377669

Start: 758731

End: 759708

Strand: Direct

Name: ybbR [H]

Synonym: lp_0819

Alternate gene names: 28377669

Gene position: 758731-759708 (Clockwise)

Preceding gene: 28377668

Following gene: 28377670

Centisome position: 22.93

GC content: 44.07

Gene sequence:

>978_bases
ATGAAAAAATTTATGAATAGCAATTGGTCAATGCGGCTACTAGCACTGCTGTGTGCGTTGGTGCTCTTCGCCTACGTTAA
TTCGTTAAAGACAACGCATAACGCCAGTATTTTGACGAATAGTTCATCGAAAACGACATTGACATCTAACCGTAAAGTGA
CCATTAGCGCGCCCTTAGAACTGAACGTGAATAGTACGAAATATTTTGTAACGGGCTATCCCGAAAATATTAAAGTTACG
ATCGAAGGGCCGTCTGCTTTAGTCACAACTACGGCTAACACGCAGAATTTTAAAGTTTATGCTAATTTATCTAAGTTGGC
AGTTGGGCGGCACAGTGTCAAAGTCGAAGTCGATGGCTTGAATAAAGAATTGAGTTATGGACTTAGTCAAAAGTACATTC
ATGTTAATATTCAGCCACGACGAACGGCTACTTATAAGGTCAGCGCAGACTTCAATAAAGCCAACGTAGCAGATGGTTAT
GAAGTTGGATCGGCACGGCTCGGAACATCATCTGTCAAAGTTACGGGCGCCGTCAGCGAAGTTAGCAAAGTCGCGAAAGT
CGTTGCGGTCGTTAATACCAACAAGAATTTAGAGAAATCCGTGAACCAGCAGGCTATCATTGAAGCATTAGATGCCAACG
GTCAAAATTTGAACGTTGTCTTGACGCCTTCGACCACGTCGGTGTATATTCCCATTACGCAGGCGACAACGACGAAAGAT
GTGCCAATCGATTTGAAAGCCAGTGGCAAGACCGCGGCGGACACCAGTTATTCATTCTCATCTGACACGAAGTCAGTGAC
GGTTACTGGCACGAAGGCGGCATTGGCGAAGTTGAAATCTTTGCCAGTCAATGTTGATGTGACGAATGTTGATTCAACCA
CGACTAAGACGGTCGATGTTTCGACTAGCGATGAGGATGGGATCTCGTCAGTTAGCCCGACGTCGGTCAAAGTAAAAATT
ACAGTTAAAAATGATTAA

Upstream 100 bases:

>100_bases
TACGGTATTTCCGCCAAGTCTTACTAACGCCTGAGGATTCAACCAAGCAAAACGCGCTTCAAAATTGGTTTGGACGAGTT
TTCGGAGGAGGTCCCCGAAA

Downstream 100 bases:

>100_bases
TCATGACACTTTTGAAATGAGGTAAATTATAATGAAATATTTTGGTACTGATGGTGTTCGGGGAATTGCAAATTCAGGCT
TAACACCTGAAATGGCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MKKFMNSNWSMRLLALLCALVLFAYVNSLKTTHNASILTNSSSKTTLTSNRKVTISAPLELNVNSTKYFVTGYPENIKVT
IEGPSALVTTTANTQNFKVYANLSKLAVGRHSVKVEVDGLNKELSYGLSQKYIHVNIQPRRTATYKVSADFNKANVADGY
EVGSARLGTSSVKVTGAVSEVSKVAKVVAVVNTNKNLEKSVNQQAIIEALDANGQNLNVVLTPSTTSVYIPITQATTTKD
VPIDLKASGKTAADTSYSFSSDTKSVTVTGTKAALAKLKSLPVNVDVTNVDSTTTKTVDVSTSDEDGISSVSPTSVKVKI
TVKND

Sequences:

>Translated_325_residues
MKKFMNSNWSMRLLALLCALVLFAYVNSLKTTHNASILTNSSSKTTLTSNRKVTISAPLELNVNSTKYFVTGYPENIKVT
IEGPSALVTTTANTQNFKVYANLSKLAVGRHSVKVEVDGLNKELSYGLSQKYIHVNIQPRRTATYKVSADFNKANVADGY
EVGSARLGTSSVKVTGAVSEVSKVAKVVAVVNTNKNLEKSVNQQAIIEALDANGQNLNVVLTPSTTSVYIPITQATTTKD
VPIDLKASGKTAADTSYSFSSDTKSVTVTGTKAALAKLKSLPVNVDVTNVDSTTTKTVDVSTSDEDGISSVSPTSVKVKI
TVKND
>Mature_325_residues
MKKFMNSNWSMRLLALLCALVLFAYVNSLKTTHNASILTNSSSKTTLTSNRKVTISAPLELNVNSTKYFVTGYPENIKVT
IEGPSALVTTTANTQNFKVYANLSKLAVGRHSVKVEVDGLNKELSYGLSQKYIHVNIQPRRTATYKVSADFNKANVADGY
EVGSARLGTSSVKVTGAVSEVSKVAKVVAVVNTNKNLEKSVNQQAIIEALDANGQNLNVVLTPSTTSVYIPITQATTTKD
VPIDLKASGKTAADTSYSFSSDTKSVTVTGTKAALAKLKSLPVNVDVTNVDSTTTKTVDVSTSDEDGISSVSPTSVKVKI
TVKND

Specific function: Unknown

COG id: COG4856

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 YbbR-like domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012505 [H]

Pfam domain/function: PF07949 YbbR [H]

EC number: NA

Molecular weight: Translated: 34641; Mature: 34641

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFMNSNWSMRLLALLCALVLFAYVNSLKTTHNASILTNSSSKTTLTSNRKVTISAPLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCEEEEECCEE
LNVNSTKYFVTGYPENIKVTIEGPSALVTTTANTQNFKVYANLSKLAVGRHSVKVEVDGL
EECCCEEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEEHHHHEECCEEEEEEECCC
NKELSYGLSQKYIHVNIQPRRTATYKVSADFNKANVADGYEVGSARLGTSSVKVTGAVSE
CCHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEECHHH
VSKVAKVVAVVNTNKNLEKSVNQQAIIEALDANGQNLNVVLTPSTTSVYIPITQATTTKD
HHHHEEEEEEEECCCCHHHHCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCC
VPIDLKASGKTAADTSYSFSSDTKSVTVTGTKAALAKLKSLPVNVDVTNVDSTTTKTVDV
CCEEEECCCCCCCCCCEECCCCCCEEEEECHHHHHHHHHCCCEEEEEECCCCCCEEEEEE
STSDEDGISSVSPTSVKVKITVKND
CCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKFMNSNWSMRLLALLCALVLFAYVNSLKTTHNASILTNSSSKTTLTSNRKVTISAPLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECCCEEEEECCEE
LNVNSTKYFVTGYPENIKVTIEGPSALVTTTANTQNFKVYANLSKLAVGRHSVKVEVDGL
EECCCEEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEEEHHHHEECCEEEEEEECCC
NKELSYGLSQKYIHVNIQPRRTATYKVSADFNKANVADGYEVGSARLGTSSVKVTGAVSE
CCHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEECCCCEEEEEECHHH
VSKVAKVVAVVNTNKNLEKSVNQQAIIEALDANGQNLNVVLTPSTTSVYIPITQATTTKD
HHHHEEEEEEEECCCCHHHHCCHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCC
VPIDLKASGKTAADTSYSFSSDTKSVTVTGTKAALAKLKSLPVNVDVTNVDSTTTKTVDV
CCEEEECCCCCCCCCCEECCCCCCEEEEECHHHHHHHHHCCCEEEEEECCCCCCEEEEEE
STSDEDGISSVSPTSVKVKITVKND
CCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]