| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is galU [H]
Identifier: 28377616
GI number: 28377616
Start: 691787
End: 692707
Strand: Direct
Name: galU [H]
Synonym: lp_0757
Alternate gene names: 28377616
Gene position: 691787-692707 (Clockwise)
Preceding gene: 28377615
Following gene: 28377618
Centisome position: 20.91
GC content: 42.45
Gene sequence:
>921_bases ATGTCAAAAGTTAGAAAAGCCGTTATCCCAGCGGCCGGATTAGGAACACGGTTTTTGCCTGCTACTAAGGCGATGCCTAA AGAAATGTTACCAATCGTTGATAAACCAACGATTCAGTTCATTGTTGACGAAGCTCGTAAATCGGGGATCGAAGACATTG TTATCGTCACGGGTAAGAGCAAGCGTAGTATTGAAGATTACTATGATTCTAACCCAGAATTAGAGGATAACTTACGGGCT AAGCACAAGGAAGAAATGCTCAAGCTGGTTCAAGAAACCACAGACATTAACTTGTACTTTATCCGGCAATCACACCCACG TGGTTTGGGCGATGCCGTTTTAACGGCTAAAGCTTTCGTTGGTGACGAACCTTTCGTCGTCATGCTTGGTGATGATTTAA TGGAAGACAAAGTACCGTTAACCAAACAGTTAATGAATAGCTATGACAAGACACATGCGTCAACGTTAGCTGTTATGAAG GTTCCTCATGAGGAAGTTTCTAAGTATGGGGTTATCAATCCTGAAAGTGAAAAGGAACCGGGCCTATACAACGTTAATAA CTTTGTTGAAAAGCCATCACCTGAAGACGCGCCTAGTGATCTTGCTATCATTGGTCGTTACTTATTAACACCAGAAATTT TTGATGTTCTTGAAAACCAAAAACCTGGTAAGGGTGACGAAATTCAATTGACGGATGCCATTGATACGTTGAACAAGACT CAGCGGGTCTTTGCCCATGAATTTAAGGGGACTCGGCACGATGTTGGCTACAAGTTTGGCTACTTGAAGACGACGATCGA ATACGGGTTAACTCATCCGGATGTTAAGGCTGACTTGCGGACTTACATCAAGGATCTTGGTGCTAAGTTATCTAAAGAAG ATAGCGCCGCTCCTAAAACAACGAAGAAACCAACTAAATAA
Upstream 100 bases:
>100_bases ATTAAGGAAGTCATTCCACAATTGATGCGGCGCGAGGGGAAACCTGAGATTCAGTAGGAATTTCCAAACTAATTTCACTA TTTTTAGGAGGATTTATCAC
Downstream 100 bases:
>100_bases TACTTGATTAATTAAAACAACCGTGAAATCTATTAAGATTTCACGGTTGTTTTTAGTTAACTGCTGAATAATTGCGATTC ACTAATTAAGCTGGCACCTA
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase 1; UDP-glucose pyrophosphorylase 1; UDPGP 1; Uridine diphosphoglucose pyrophosphorylase 1 [H]
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSKVRKAVIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQFIVDEARKSGIEDIVIVTGKSKRSIEDYYDSNPELEDNLRA KHKEEMLKLVQETTDINLYFIRQSHPRGLGDAVLTAKAFVGDEPFVVMLGDDLMEDKVPLTKQLMNSYDKTHASTLAVMK VPHEEVSKYGVINPESEKEPGLYNVNNFVEKPSPEDAPSDLAIIGRYLLTPEIFDVLENQKPGKGDEIQLTDAIDTLNKT QRVFAHEFKGTRHDVGYKFGYLKTTIEYGLTHPDVKADLRTYIKDLGAKLSKEDSAAPKTTKKPTK
Sequences:
>Translated_306_residues MSKVRKAVIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQFIVDEARKSGIEDIVIVTGKSKRSIEDYYDSNPELEDNLRA KHKEEMLKLVQETTDINLYFIRQSHPRGLGDAVLTAKAFVGDEPFVVMLGDDLMEDKVPLTKQLMNSYDKTHASTLAVMK VPHEEVSKYGVINPESEKEPGLYNVNNFVEKPSPEDAPSDLAIIGRYLLTPEIFDVLENQKPGKGDEIQLTDAIDTLNKT QRVFAHEFKGTRHDVGYKFGYLKTTIEYGLTHPDVKADLRTYIKDLGAKLSKEDSAAPKTTKKPTK >Mature_305_residues SKVRKAVIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQFIVDEARKSGIEDIVIVTGKSKRSIEDYYDSNPELEDNLRAK HKEEMLKLVQETTDINLYFIRQSHPRGLGDAVLTAKAFVGDEPFVVMLGDDLMEDKVPLTKQLMNSYDKTHASTLAVMKV PHEEVSKYGVINPESEKEPGLYNVNNFVEKPSPEDAPSDLAIIGRYLLTPEIFDVLENQKPGKGDEIQLTDAIDTLNKTQ RVFAHEFKGTRHDVGYKFGYLKTTIEYGLTHPDVKADLRTYIKDLGAKLSKEDSAAPKTTKKPTK
Specific function: May Play A Role In Stationary Phase Survival. [C]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=296, Percent_Identity=43.5810810810811, Blast_Score=233, Evalue=9e-63, Organism=Escherichia coli, GI1788355, Length=291, Percent_Identity=40.5498281786942, Blast_Score=202, Evalue=2e-53, Organism=Escherichia coli, GI1788351, Length=262, Percent_Identity=25.1908396946565, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1790224, Length=229, Percent_Identity=24.4541484716157, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320148, Length=265, Percent_Identity=25.2830188679245, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI21355443, Length=269, Percent_Identity=24.5353159851301, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI24644084, Length=269, Percent_Identity=24.5353159851301, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 34249; Mature: 34117
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVRKAVIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQFIVDEARKSGIEDIVIVTGKS CCCHHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC KRSIEDYYDSNPELEDNLRAKHKEEMLKLVQETTDINLYFIRQSHPRGLGDAVLTAKAFV CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHC GDEPFVVMLGDDLMEDKVPLTKQLMNSYDKTHASTLAVMKVPHEEVSKYGVINPESEKEP CCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCCCCCCCC GLYNVNNFVEKPSPEDAPSDLAIIGRYLLTPEIFDVLENQKPGKGDEIQLTDAIDTLNKT CCCCHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHH QRVFAHEFKGTRHDVGYKFGYLKTTIEYGLTHPDVKADLRTYIKDLGAKLSKEDSAAPKT HHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TKKPTK CCCCCC >Mature Secondary Structure SKVRKAVIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQFIVDEARKSGIEDIVIVTGKS CCHHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC KRSIEDYYDSNPELEDNLRAKHKEEMLKLVQETTDINLYFIRQSHPRGLGDAVLTAKAFV CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHC GDEPFVVMLGDDLMEDKVPLTKQLMNSYDKTHASTLAVMKVPHEEVSKYGVINPESEKEP CCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCCCCCCCC GLYNVNNFVEKPSPEDAPSDLAIIGRYLLTPEIFDVLENQKPGKGDEIQLTDAIDTLNKT CCCCHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHH QRVFAHEFKGTRHDVGYKFGYLKTTIEYGLTHPDVKADLRTYIKDLGAKLSKEDSAAPKT HHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC TKKPTK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296 [H]