Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is prfB-N

Identifier: 28377600

GI number: 28377600

Start: 678041

End: 678115

Strand: Direct

Name: prfB-N

Synonym: lp_0740

Alternate gene names: NA

Gene position: 678041-678115 (Clockwise)

Preceding gene: 28377599

Following gene: 28377601

Centisome position: 20.5

GC content: 41.33

Gene sequence:

>75_bases
GTGGAATTAAGTGAATATAAACACCTGATTGAAGAAATGCAAAGTGCTGTCGACGACTTTAGGGGGTCGCTTTGA

Upstream 100 bases:

>100_bases
AACGTTAGTGCTAGCGAGTCTAAGACTAAGGTCTTAGGCTCGTTTTACAGTTAAACCAGATATTAAATAATTAATAAATA
AGTTGAAAGAAGGGTCCTTT

Downstream 100 bases:

>100_bases
CTTAGATGCTTTGAACGAAAGCATTCAAGAAAATGAAGCTCGAATGGCCGAACCCGGTTTTTGGGACGACCAGGCTGCCG
CCCAGAAAGTCATCGATGAG

Product: peptide chain release factor 2, N-terminal fragment

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 24; Mature: 24

Protein sequence:

>24_residues
MELSEYKHLIEEMQSAVDDFRGSL

Sequences:

>Translated_24_residues
MELSEYKHLIEEMQSAVDDFRGSL
>Mature_24_residues
MELSEYKHLIEEMQSAVDDFRGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 2828; Mature: 2828

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELSEYKHLIEEMQSAVDDFRGSL
CCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MELSEYKHLIEEMQSAVDDFRGSL
CCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA