Click here to switch to the map view.

The map label for this gene is gpp [H]

Identifier: 28377583

GI number: 28377583

Start: 657467

End: 658192

Strand: Direct

Name: gpp [H]

Synonym: lp_0717

Alternate gene names: 28377583

Gene position: 657467-658192 (Clockwise)

Preceding gene: 28377576

Following gene: 28377584

Centisome position: 19.87

GC content: 47.93

Gene sequence:

>726_bases
ATGAAGTTGTTGGCGATTGATACTTCGAATCGGCCATTGAGTGTCGCGGTATTAGAAGATACCCAGATCTTGGCCACAAC
GACCACTAATGTTGGCCGTAACCACAGTAGTACATTATTACCGATTATTGAACAAGCCATGGCTCAAGCTAAATTGGCAC
CAGCTGATTTAGACCGGATCGTCGTTGCTGCCGGACCAGGGTCGTATACGGGGTTGCGAATTGGCGTGACGACTGCTAAA
ACACTTGCCTTTACATTAGATAAAGCCTTAGTTGGTGTATCGAGTTTGGCCGTGTTAGCTGGCAACATTGTGACGGAAGG
CCAATTAGTGGCGCCGTTATTTGATGCGCGTCGTGACAACATCTTTGCCGGGTTATATCGGATTAAGAACCAGCGTCCAG
TTGCCGTTATCGCTGATCAACATATCAGTGTGACCGAGTGGGGCCAACGATTAGCTAGTTATGATGAACCAATTACCTTT
GTCGGCGCGGATGTCGATCAATATGCGGATGCTTTGCAGCAATCGTTAGCCAAGCAGTTCGTTCGTGCAGCCCCACAACT
TGACTTGCCCCAAGCCGTAGTACTAGGTTTGATGGGTCGAACGCTGACACCCGTGAGTGAAATTCATAACTTTGTGCCGA
ACTATTTGCGTTTAACGCAAGCTGAACGTGATTGGCAAGCCAAGCACCCAGAAAAGGAACATGCGCCCTATGTTGAGAAA
ATTTAA

Upstream 100 bases:

>100_bases
TTCTGGATTGAATTGGTTGGTTACTACCGTAAAGCTTTCAAAGTAAGTAAATTATGATAAGATATGTGAAGTAATTCAAA
ATGAGGAGTTTTTTAAAATT

Downstream 100 bases:

>100_bases
GGAGTACTTTCAAAAAATGACCACCGGTGGCAATCAACGCCGGCCAACGTGTATTGGCCATTCAAAATCACATCGTTAAA
GTGGGCGAAGTCAATTACTA

Product: glycoprotein endopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKLLAIDTSNRPLSVAVLEDTQILATTTTNVGRNHSSTLLPIIEQAMAQAKLAPADLDRIVVAAGPGSYTGLRIGVTTAK
TLAFTLDKALVGVSSLAVLAGNIVTEGQLVAPLFDARRDNIFAGLYRIKNQRPVAVIADQHISVTEWGQRLASYDEPITF
VGADVDQYADALQQSLAKQFVRAAPQLDLPQAVVLGLMGRTLTPVSEIHNFVPNYLRLTQAERDWQAKHPEKEHAPYVEK
I

Sequences:

>Translated_241_residues
MKLLAIDTSNRPLSVAVLEDTQILATTTTNVGRNHSSTLLPIIEQAMAQAKLAPADLDRIVVAAGPGSYTGLRIGVTTAK
TLAFTLDKALVGVSSLAVLAGNIVTEGQLVAPLFDARRDNIFAGLYRIKNQRPVAVIADQHISVTEWGQRLASYDEPITF
VGADVDQYADALQQSLAKQFVRAAPQLDLPQAVVLGLMGRTLTPVSEIHNFVPNYLRLTQAERDWQAKHPEKEHAPYVEK
I
>Mature_241_residues
MKLLAIDTSNRPLSVAVLEDTQILATTTTNVGRNHSSTLLPIIEQAMAQAKLAPADLDRIVVAAGPGSYTGLRIGVTTAK
TLAFTLDKALVGVSSLAVLAGNIVTEGQLVAPLFDARRDNIFAGLYRIKNQRPVAVIADQHISVTEWGQRLASYDEPITF
VGADVDQYADALQQSLAKQFVRAAPQLDLPQAVVLGLMGRTLTPVSEIHNFVPNYLRLTQAERDWQAKHPEKEHAPYVEK
I

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=129, Percent_Identity=31.0077519379845, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 26172; Mature: 26172

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLAIDTSNRPLSVAVLEDTQILATTTTNVGRNHSSTLLPIIEQAMAQAKLAPADLDRI
CEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
VVAAGPGSYTGLRIGVTTAKTLAFTLDKALVGVSSLAVLAGNIVTEGQLVAPLFDARRDN
EEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCH
IFAGLYRIKNQRPVAVIADQHISVTEWGQRLASYDEPITFVGADVDQYADALQQSLAKQF
HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
VRAAPQLDLPQAVVLGLMGRTLTPVSEIHNFVPNYLRLTQAERDWQAKHPEKEHAPYVEK
HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHCC
I
C
>Mature Secondary Structure
MKLLAIDTSNRPLSVAVLEDTQILATTTTNVGRNHSSTLLPIIEQAMAQAKLAPADLDRI
CEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
VVAAGPGSYTGLRIGVTTAKTLAFTLDKALVGVSSLAVLAGNIVTEGQLVAPLFDARRDN
EEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCH
IFAGLYRIKNQRPVAVIADQHISVTEWGQRLASYDEPITFVGADVDQYADALQQSLAKQF
HHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
VRAAPQLDLPQAVVLGLMGRTLTPVSEIHNFVPNYLRLTQAERDWQAKHPEKEHAPYVEK
HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]