Click here to switch to the map view.

The map label for this gene is 28377461

Identifier: 28377461

GI number: 28377461

Start: 552305

End: 553297

Strand: Direct

Name: 28377461

Synonym: lp_0580

Alternate gene names: NA

Gene position: 552305-553297 (Clockwise)

Preceding gene: 28377460

Following gene: 28377462

Centisome position: 16.69

GC content: 37.46

Gene sequence:

>993_bases
ATGAAATGGCGAGGGTATCTAACACCTGTAACAGAAAATTATCTGCATGCATACGGGGTAGGCTACATCTCATATGTGCT
GGCACGTAAGTTTCATGTTGATTCCGTCAAGGCGTTTGTGACTGGGACACTTCATGATTTAGGTGGTGCTGTTCCAGCTG
ATGAAAGGGTGACCGTGGCTGAGTCTATAGGTATTAGCCTGAATGATGAGGAACGTGAAGTACCGTTACTAGTACATGCT
AAGTTAGGAAAGTATTTTGCTCAAACCCTATTTGATATTACGGATGAAGATATGTTGAATGCTATTTTATTCCATACAAC
GTGTATTGATCGTGCAAGTGATCTCGTTAAAATCGTATTTTTAGCAGATAAAATAAGATGGGATCGAAACGGAACTCCAC
CTTATCTGGATGGTCTATTAGCTGCGTTGGAGATTTCACTTGATGATGGTTGTTCTTATTTTTTGAAATGGCTATGGAAC
TCTGACTTGTATATTGTTCATCCGTACTTATCACGAAGCTATGGTGCCTATGTAAGGCAGCAACAATATAACCCAATCAG
TTTGCAAGATTTTTCGGTATTACAGGGAAACCTTAATGAAAATTTGGTCAAAAAATATTATTTGCATGATATTTATCAGG
AATTTCATAGGACATTTTATCATGCACATTTAGCAAGTGTGTTAGCAAGTAAACATTCTGTGAATACTGAAGAGGCATAT
GTAACCAGCGCATTAGTTAATATGACCAATACAATTAAAGATGATGAACTGGAGACAATAGCAAGTGTTTTAAATTTGAA
TGTACAGGTTCCAATTAGGCCACAGCTAACGAGTATACTTGCACGTGATGAATATGGCATAACAAGTTTAGAAATGCTGA
AAACTCTGAAAAGTTTTCCACAGATACCTAGTAACCATAATTCATTATTGTGGGTTGTGGTGATGAGCTGGATATGCCAG
AAAAGCATTAAATGTGAGGTGGAAGATGAATAG

Upstream 100 bases:

>100_bases
AGGCCAAGCATGCAAAGCCGTATGTTGTACTTGTCGACGATGAAAATAGATTGACGAAGCGAGTACGTTATGAAAAGCAT
GGATTATTAGCAGAAGAACT

Downstream 100 bases:

>100_bases
AGAAGAAGTCTTAAATGTGATTTTATCATATGCGGAAATCACACCTAATAGTCTTGCAGTTGTTGATAATTCTGACGAGT
TAACATATAGCGAGTTGAGA

Product: HD superfamily hydrolase

Products: NA

Alternate protein names: ORF 2 [H]

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKWRGYLTPVTENYLHAYGVGYISYVLARKFHVDSVKAFVTGTLHDLGGAVPADERVTVAESIGISLNDEEREVPLLVHA
KLGKYFAQTLFDITDEDMLNAILFHTTCIDRASDLVKIVFLADKIRWDRNGTPPYLDGLLAALEISLDDGCSYFLKWLWN
SDLYIVHPYLSRSYGAYVRQQQYNPISLQDFSVLQGNLNENLVKKYYLHDIYQEFHRTFYHAHLASVLASKHSVNTEEAY
VTSALVNMTNTIKDDELETIASVLNLNVQVPIRPQLTSILARDEYGITSLEMLKTLKSFPQIPSNHNSLLWVVVMSWICQ
KSIKCEVEDE

Sequences:

>Translated_330_residues
MKWRGYLTPVTENYLHAYGVGYISYVLARKFHVDSVKAFVTGTLHDLGGAVPADERVTVAESIGISLNDEEREVPLLVHA
KLGKYFAQTLFDITDEDMLNAILFHTTCIDRASDLVKIVFLADKIRWDRNGTPPYLDGLLAALEISLDDGCSYFLKWLWN
SDLYIVHPYLSRSYGAYVRQQQYNPISLQDFSVLQGNLNENLVKKYYLHDIYQEFHRTFYHAHLASVLASKHSVNTEEAY
VTSALVNMTNTIKDDELETIASVLNLNVQVPIRPQLTSILARDEYGITSLEMLKTLKSFPQIPSNHNSLLWVVVMSWICQ
KSIKCEVEDE
>Mature_330_residues
MKWRGYLTPVTENYLHAYGVGYISYVLARKFHVDSVKAFVTGTLHDLGGAVPADERVTVAESIGISLNDEEREVPLLVHA
KLGKYFAQTLFDITDEDMLNAILFHTTCIDRASDLVKIVFLADKIRWDRNGTPPYLDGLLAALEISLDDGCSYFLKWLWN
SDLYIVHPYLSRSYGAYVRQQQYNPISLQDFSVLQGNLNENLVKKYYLHDIYQEFHRTFYHAHLASVLASKHSVNTEEAY
VTSALVNMTNTIKDDELETIASVLNLNVQVPIRPQLTSILARDEYGITSLEMLKTLKSFPQIPSNHNSLLWVVVMSWICQ
KSIKCEVEDE

Specific function: Unknown

COG id: COG1713

COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37648; Mature: 37648

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWRGYLTPVTENYLHAYGVGYISYVLARKFHVDSVKAFVTGTLHDLGGAVPADERVTVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEHH
ESIGISLNDEEREVPLLVHAKLGKYFAQTLFDITDEDMLNAILFHTTCIDRASDLVKIVF
HHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LADKIRWDRNGTPPYLDGLLAALEISLDDGCSYFLKWLWNSDLYIVHPYLSRSYGAYVRQ
HHHHHEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECHHHHCHHHHHHHH
QQYNPISLQDFSVLQGNLNENLVKKYYLHDIYQEFHRTFYHAHLASVLASKHSVNTEEAY
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VTSALVNMTNTIKDDELETIASVLNLNVQVPIRPQLTSILARDEYGITSLEMLKTLKSFP
HHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
QIPSNHNSLLWVVVMSWICQKSIKCEVEDE
CCCCCCCCCHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure
MKWRGYLTPVTENYLHAYGVGYISYVLARKFHVDSVKAFVTGTLHDLGGAVPADERVTVA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEHH
ESIGISLNDEEREVPLLVHAKLGKYFAQTLFDITDEDMLNAILFHTTCIDRASDLVKIVF
HHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LADKIRWDRNGTPPYLDGLLAALEISLDDGCSYFLKWLWNSDLYIVHPYLSRSYGAYVRQ
HHHHHEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECHHHHCHHHHHHHH
QQYNPISLQDFSVLQGNLNENLVKKYYLHDIYQEFHRTFYHAHLASVLASKHSVNTEEAY
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
VTSALVNMTNTIKDDELETIASVLNLNVQVPIRPQLTSILARDEYGITSLEMLKTLKSFP
HHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHCC
QIPSNHNSLLWVVVMSWICQKSIKCEVEDE
CCCCCCCCCHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8439160 [H]