Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377438

Identifier: 28377438

GI number: 28377438

Start: 512374

End: 512898

Strand: Direct

Name: 28377438

Synonym: lp_0555

Alternate gene names: NA

Gene position: 512374-512898 (Clockwise)

Preceding gene: 28377437

Following gene: 28377439

Centisome position: 15.49

GC content: 42.48

Gene sequence:

>525_bases
ATGGCCCATATCTGGATGCAAAGGCATTTACCTGCCAGAGATGACGTGGTTATTAAGTATATGACTAGTAGTCAGTTATT
CAGAATTATAAGATGTTTATTCAATCGAACCTCGAAAATTGAGTTTGTTAGCGTTAAGCTTAATTTAAGAAATCATACCA
TCATAAATAACGTAAGCGACCATGATGATGACCAAGGAGGATTTGAAATGGCGGTAACTAAAATTGATTTAAAAACCACG
ATGACTTACCGGGAGCATGCAATTACTAGTAAATCATTTGCTCGAAAATTAGGGATTGAACTGCCGTTTGCGATGTACGC
AATGGCGGCGGGTGAAAGTATTAGTGCTGAACAATCCACGCTGACCCGCTTATTTGAGGTTGTTGATGGTACTTTGACCG
TCCGTTTGGCGACGGAGACCGACCAAGAAGTGCATGCGGGCGAGATGTTAGTGGTGCCAGCTCATACGGTCCATACGTTG
GTCGCTGAGCAGCCGTGCCAGTTTATTCAATTAGAAACGAAATAG

Upstream 100 bases:

>100_bases
AACTAGTTGACTGAATAAATCAAATTTTCCACAGAACTGTTATCAAATGTAGTAACAGCAGACTGTTCAGCGTCGCAATG
ACGCTTGGACAGCTTTTTGC

Downstream 100 bases:

>100_bases
GCCTTAATAGCGAGATGCGGAGGAATTCAAATGAGTTTAATTAACAAAATTGATCATGCTAAGGTCCTCGATTTAACTGA
ACAAATTCCACTGGATGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAHIWMQRHLPARDDVVIKYMTSSQLFRIIRCLFNRTSKIEFVSVKLNLRNHTIINNVSDHDDDQGGFEMAVTKIDLKTT
MTYREHAITSKSFARKLGIELPFAMYAMAAGESISAEQSTLTRLFEVVDGTLTVRLATETDQEVHAGEMLVVPAHTVHTL
VAEQPCQFIQLETK

Sequences:

>Translated_174_residues
MAHIWMQRHLPARDDVVIKYMTSSQLFRIIRCLFNRTSKIEFVSVKLNLRNHTIINNVSDHDDDQGGFEMAVTKIDLKTT
MTYREHAITSKSFARKLGIELPFAMYAMAAGESISAEQSTLTRLFEVVDGTLTVRLATETDQEVHAGEMLVVPAHTVHTL
VAEQPCQFIQLETK
>Mature_173_residues
AHIWMQRHLPARDDVVIKYMTSSQLFRIIRCLFNRTSKIEFVSVKLNLRNHTIINNVSDHDDDQGGFEMAVTKIDLKTTM
TYREHAITSKSFARKLGIELPFAMYAMAAGESISAEQSTLTRLFEVVDGTLTVRLATETDQEVHAGEMLVVPAHTVHTLV
AEQPCQFIQLETK

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19751; Mature: 19620

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHIWMQRHLPARDDVVIKYMTSSQLFRIIRCLFNRTSKIEFVSVKLNLRNHTIINNVSD
CCCEEEECCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCC
HDDDQGGFEMAVTKIDLKTTMTYREHAITSKSFARKLGIELPFAMYAMAAGESISAEQST
CCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHH
LTRLFEVVDGTLTVRLATETDQEVHAGEMLVVPAHTVHTLVAEQPCQFIQLETK
HHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
AHIWMQRHLPARDDVVIKYMTSSQLFRIIRCLFNRTSKIEFVSVKLNLRNHTIINNVSD
CCEEEECCCCCCCCEEEEEECHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCC
HDDDQGGFEMAVTKIDLKTTMTYREHAITSKSFARKLGIELPFAMYAMAAGESISAEQST
CCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHH
LTRLFEVVDGTLTVRLATETDQEVHAGEMLVVPAHTVHTLVAEQPCQFIQLETK
HHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA