| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is hslO
Identifier: 28377432
GI number: 28377432
Start: 498768
End: 499655
Strand: Direct
Name: hslO
Synonym: lp_0548
Alternate gene names: 28377432
Gene position: 498768-499655 (Clockwise)
Preceding gene: 28377431
Following gene: 28377433
Centisome position: 15.08
GC content: 45.83
Gene sequence:
>888_bases ATGGCAGATTATTTAGTAAAAAGCGTCGCGGGTAATGAGATGTTTCGAGCGTACGCAGTTAGCGCAACGGGCGTGGTTGC TGAAGCCCAACGCCGACATGATACCTGGAGTGCAGCATCAGCAGCGTTAGGCCGCAGCTTGGTTGGTACGTTATTATTAG CATCATCGGTTTTAAAGGGTGAAGAACAAATGACCGTTAAAATCAACGGGAACGGTCCTGTTGGTGGTATCGTTGTTGAT GGCAATGCTAAAGGTACGGTCAAGGGGTATTTACAGCACCCCCATGTGCACTTGCCTTTGAATGATAAGCATAAGATCGA TGTGAAGGCGGCTGTTGGAACTGATGGCTTTTTATCTGTGACTAAGGATCAGGGGGTTGGGGATCCATTCACCGGAACGG TTGCGTTAGTTTCTGGTGAATTAGGCGAAGACTTTACGTATTACTTAGCACAGTCCGAACAGATTCCATCAGCTGTTGGC TTGTCGGTGTTTGTAAATGACGACAATTCGATTGGAGTTGCCGGTGGCTTTTTGGTGCAAGTATTGCCAAATGCGACGGA TGAAGCCATCAGCTCGCTAGAAAACAAGCTCAAAGACATGCCATTAGTCTCCCAATTGATGCGTGATGGTAAGTCACCAG AAGATATTTTGGATTTATTATTTGATGGTGACGTTAAGGTATTAGATAAAATGCCAGTTAAGTTTGAATGCGATTGTTCT AAAGAACGATTTGCCGAAGCACTAATGGCTTTGCCCAAGCATGAGGTTCAAGCAATGATTGATGAAGATCATGGTGCCAC GGCAGTTTGTCATTTTTGTGGGGACCAGTATCAGTTCAGTGAACGCGAACTAGAAGCAGTGCTCTCACGGTCCAAGGGTG ACGCTTAA
Upstream 100 bases:
>100_bases TTATGCGTTATGATATTTCAGGAAAATAAATCAATTGCGTTAATTCGGTTATGAGCGTCGGGTCGCAATTAAAGACGGAT TGAGATAGGAGTATGATTAA
Downstream 100 bases:
>100_bases TGAATCAAGAGTGGCAGATCGGTGATGTGACGATTCCCAATCGTGTCGTAGTGGCACCGATGGCCGGCGTGACTAACGCG GCCTTTCGAGTAATCTGCAA
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MADYLVKSVAGNEMFRAYAVSATGVVAEAQRRHDTWSAASAALGRSLVGTLLLASSVLKGEEQMTVKINGNGPVGGIVVD GNAKGTVKGYLQHPHVHLPLNDKHKIDVKAAVGTDGFLSVTKDQGVGDPFTGTVALVSGELGEDFTYYLAQSEQIPSAVG LSVFVNDDNSIGVAGGFLVQVLPNATDEAISSLENKLKDMPLVSQLMRDGKSPEDILDLLFDGDVKVLDKMPVKFECDCS KERFAEALMALPKHEVQAMIDEDHGATAVCHFCGDQYQFSERELEAVLSRSKGDA
Sequences:
>Translated_295_residues MADYLVKSVAGNEMFRAYAVSATGVVAEAQRRHDTWSAASAALGRSLVGTLLLASSVLKGEEQMTVKINGNGPVGGIVVD GNAKGTVKGYLQHPHVHLPLNDKHKIDVKAAVGTDGFLSVTKDQGVGDPFTGTVALVSGELGEDFTYYLAQSEQIPSAVG LSVFVNDDNSIGVAGGFLVQVLPNATDEAISSLENKLKDMPLVSQLMRDGKSPEDILDLLFDGDVKVLDKMPVKFECDCS KERFAEALMALPKHEVQAMIDEDHGATAVCHFCGDQYQFSERELEAVLSRSKGDA >Mature_294_residues ADYLVKSVAGNEMFRAYAVSATGVVAEAQRRHDTWSAASAALGRSLVGTLLLASSVLKGEEQMTVKINGNGPVGGIVVDG NAKGTVKGYLQHPHVHLPLNDKHKIDVKAAVGTDGFLSVTKDQGVGDPFTGTVALVSGELGEDFTYYLAQSEQIPSAVGL SVFVNDDNSIGVAGGFLVQVLPNATDEAISSLENKLKDMPLVSQLMRDGKSPEDILDLLFDGDVKVLDKMPVKFECDCSK ERFAEALMALPKHEVQAMIDEDHGATAVCHFCGDQYQFSERELEAVLSRSKGDA
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=283, Percent_Identity=28.9752650176678, Blast_Score=105, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_LACPL (Q88Z30)
Other databases:
- EMBL: AL935253 - RefSeq: NP_784324.1 - ProteinModelPortal: Q88Z30 - SMR: Q88Z30 - GeneID: 1061902 - GenomeReviews: AL935263_GR - KEGG: lpl:lp_0548 - NMPDR: fig|220668.1.peg.458 - HOGENOM: HBG286231 - OMA: VMLGRAM - ProtClustDB: PRK00114 - BioCyc: LPLA220668:LP_0548-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 31472; Mature: 31341
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADYLVKSVAGNEMFRAYAVSATGVVAEAQRRHDTWSAASAALGRSLVGTLLLASSVLKG CCHHHHHHHCCCHHHHEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC EEQMTVKINGNGPVGGIVVDGNAKGTVKGYLQHPHVHLPLNDKHKIDVKAAVGTDGFLSV CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEECCCCCEEE TKDQGVGDPFTGTVALVSGELGEDFTYYLAQSEQIPSAVGLSVFVNDDNSIGVAGGFLVQ ECCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHCEEEEEECCCCEEECCHHHEE VLPNATDEAISSLENKLKDMPLVSQLMRDGKSPEDILDLLFDGDVKVLDKMPVKFECDCS ECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCEEECCCC KERFAEALMALPKHEVQAMIDEDHGATAVCHFCGDQYQFSERELEAVLSRSKGDA HHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure ADYLVKSVAGNEMFRAYAVSATGVVAEAQRRHDTWSAASAALGRSLVGTLLLASSVLKG CHHHHHHHCCCHHHHEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC EEQMTVKINGNGPVGGIVVDGNAKGTVKGYLQHPHVHLPLNDKHKIDVKAAVGTDGFLSV CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCEEEECCCCCCEEEEEEEECCCCCEEE TKDQGVGDPFTGTVALVSGELGEDFTYYLAQSEQIPSAVGLSVFVNDDNSIGVAGGFLVQ ECCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCHHCEEEEEECCCCEEECCHHHEE VLPNATDEAISSLENKLKDMPLVSQLMRDGKSPEDILDLLFDGDVKVLDKMPVKFECDCS ECCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCCEEEECCCCCEEECCCC KERFAEALMALPKHEVQAMIDEDHGATAVCHFCGDQYQFSERELEAVLSRSKGDA HHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566