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The map label for this gene is yadF [H]

Identifier: 28199671

GI number: 28199671

Start: 2102738

End: 2103400

Strand: Reverse

Name: yadF [H]

Synonym: PD1800

Alternate gene names: 28199671

Gene position: 2103400-2102738 (Counterclockwise)

Preceding gene: 28199672

Following gene: 28199670

Centisome position: 83.47

GC content: 51.58

Gene sequence:

>663_bases
ATGCATTCACTTGAGCACTTGCTGCAAAACAACCGCAATTGGTGTGAGCGGATTAACCAAGAGGACCCGGAGTTCTTCGC
GCGTCTGTCCAAGCAACAGTCCCCTGAGTATTTATGGATTGGCTGCTCAGATTCGCGTGTACCGGCGAACCAGATTATTG
ATATGGCGCCAGGGGAGGTATTCGTACACCGCAATGTTGCTAACGTGGTGGTGCATACTGACTTGAATTGTCTTTCGGTG
ATTCAATTTGCAATTGATGTCCTTAAGGTCAAGCACATCTTAGTGGTGGGGCATTATGGTTGTGGGGGTGTCCTTGCCAG
TTTGACTCGAGCGCGCCTGGGCTTGGTCGATAATTGGATCCGTCATGTGACCGATGTTGCTGAGAAGCACAACCCCTATT
TGGAGACACTTGGTGCACTTGCTGACCAGCATGCACGGTTGTGCGAGCTAAATGTGCTTGAGCAAGTGATGAATGTCTGT
AGCACGAGCATCGTGCGTGATGCGTGGAGCCGTACTCAGCCGCTGAGTGTGCACGGTTGGGTGTATAGCTTATCCAATGG
GTTGGTGCATGATCTTGGGATTGATGTGGATCGCTTCGAGATGTTGCCGTCCTGCTATGCCGATGCACTGGCAAGGATCC
AGGCTGATCGCGTTGTGCGTTGA

Upstream 100 bases:

>100_bases
TTTCCTTTGCCTGTTCTTGTCTGCATTCACTAACATTCGTGCCTTTCATCCTCGCCATGTGTGTTTAGGCACACTTAAAC
CATTCGGGATCAATACGTAG

Downstream 100 bases:

>100_bases
ATCGTTTTTCATAGCCATTCTATTTTTCCCCAGTTGCACGGGTGTGACGTGGTAGGCAGCAAATAGCATCACTGTGTATG
AATGTATCCAGCTCCAACGA

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase 2 [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MHSLEHLLQNNRNWCERINQEDPEFFARLSKQQSPEYLWIGCSDSRVPANQIIDMAPGEVFVHRNVANVVVHTDLNCLSV
IQFAIDVLKVKHILVVGHYGCGGVLASLTRARLGLVDNWIRHVTDVAEKHNPYLETLGALADQHARLCELNVLEQVMNVC
STSIVRDAWSRTQPLSVHGWVYSLSNGLVHDLGIDVDRFEMLPSCYADALARIQADRVVR

Sequences:

>Translated_220_residues
MHSLEHLLQNNRNWCERINQEDPEFFARLSKQQSPEYLWIGCSDSRVPANQIIDMAPGEVFVHRNVANVVVHTDLNCLSV
IQFAIDVLKVKHILVVGHYGCGGVLASLTRARLGLVDNWIRHVTDVAEKHNPYLETLGALADQHARLCELNVLEQVMNVC
STSIVRDAWSRTQPLSVHGWVYSLSNGLVHDLGIDVDRFEMLPSCYADALARIQADRVVR
>Mature_220_residues
MHSLEHLLQNNRNWCERINQEDPEFFARLSKQQSPEYLWIGCSDSRVPANQIIDMAPGEVFVHRNVANVVVHTDLNCLSV
IQFAIDVLKVKHILVVGHYGCGGVLASLTRARLGLVDNWIRHVTDVAEKHNPYLETLGALADQHARLCELNVLEQVMNVC
STSIVRDAWSRTQPLSVHGWVYSLSNGLVHDLGIDVDRFEMLPSCYADALARIQADRVVR

Specific function: Unknown

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1786318, Length=216, Percent_Identity=46.2962962962963, Blast_Score=223, Evalue=9e-60,
Organism=Escherichia coli, GI1786534, Length=173, Percent_Identity=29.4797687861272, Blast_Score=81, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6324292, Length=199, Percent_Identity=31.1557788944724, Blast_Score=93, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765
- InterPro:   IPR015892 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 24830; Mature: 24830

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSLEHLLQNNRNWCERINQEDPEFFARLSKQQSPEYLWIGCSDSRVPANQIIDMAPGEV
CCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCE
FVHRNVANVVVHTDLNCLSVIQFAIDVLKVKHILVVGHYGCGGVLASLTRARLGLVDNWI
EEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH
RHVTDVAEKHNPYLETLGALADQHARLCELNVLEQVMNVCSTSIVRDAWSRTQPLSVHGW
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VYSLSNGLVHDLGIDVDRFEMLPSCYADALARIQADRVVR
HHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSLEHLLQNNRNWCERINQEDPEFFARLSKQQSPEYLWIGCSDSRVPANQIIDMAPGEV
CCHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCCE
FVHRNVANVVVHTDLNCLSVIQFAIDVLKVKHILVVGHYGCGGVLASLTRARLGLVDNWI
EEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHH
RHVTDVAEKHNPYLETLGALADQHARLCELNVLEQVMNVCSTSIVRDAWSRTQPLSVHGW
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
VYSLSNGLVHDLGIDVDRFEMLPSCYADALARIQADRVVR
HHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 10493123 [H]