Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is hicA
Identifier: 28199227
GI number: 28199227
Start: 1567974
End: 1568228
Strand: Reverse
Name: hicA
Synonym: PD1343
Alternate gene names: NA
Gene position: 1568228-1567974 (Counterclockwise)
Preceding gene: 28199228
Following gene: 28199226
Centisome position: 62.24
GC content: 50.2
Gene sequence:
>255_bases ATGAAGCGTAAGCACGCTAAAACTCTCAGCGCTATATACACACGCCCTGTTTCGGCCAACATTCAATGGCGCGATATTGA AGCGCTGTTCGTGGAGCTTGGAGCGAAAGTAGAAGAACGTGAAGGTTCTCGTATGTTGGTGCGACTGTTCGGTGAACGTC GGATATTCCACCGGCCCCACCCTTCTCCTAACACTGACAAGGGTGCTGTTGAATCAATCCGAGCTTGGTTGAAATCGAAC GGAGTTACACCATGA
Upstream 100 bases:
>100_bases CAGGCGGCGACGCAGTTGCAAGAGGCGTTGCAGACAGATGCTGCGTGATGTGCTCGTTGACCTCTCGCATTAGGTACTAT ATTATAGTACCATATAATCT
Downstream 100 bases:
>100_bases AGAACATCATGACTATTGAGAGCTTTAAAGCCATCATTACCTATGATCCGGAGATCGACATGTTTCGCGGTGAATTTGTG GGTATCAATGGTGGTGCTGA
Product: HicA-related protein
Products: NA
Alternate protein names: HicA-Related Protein; HicA-Like Protein; Addiction Module HicA-Related Protein; HicA-Like Addiction Module; Xin-Antitoxin Systems HicA
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKRKHAKTLSAIYTRPVSANIQWRDIEALFVELGAKVEEREGSRMLVRLFGERRIFHRPHPSPNTDKGAVESIRAWLKSN GVTP
Sequences:
>Translated_84_residues MKRKHAKTLSAIYTRPVSANIQWRDIEALFVELGAKVEEREGSRMLVRLFGERRIFHRPHPSPNTDKGAVESIRAWLKSN GVTP >Mature_84_residues MKRKHAKTLSAIYTRPVSANIQWRDIEALFVELGAKVEEREGSRMLVRLFGERRIFHRPHPSPNTDKGAVESIRAWLKSN GVTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9639; Mature: 9639
Theoretical pI: Translated: 11.28; Mature: 11.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKHAKTLSAIYTRPVSANIQWRDIEALFVELGAKVEEREGSRMLVRLFGERRIFHRPH CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCC PSPNTDKGAVESIRAWLKSNGVTP CCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRKHAKTLSAIYTRPVSANIQWRDIEALFVELGAKVEEREGSRMLVRLFGERRIFHRPH CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCC PSPNTDKGAVESIRAWLKSNGVTP CCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA