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The map label for this gene is hicB

Identifier: 28199226

GI number: 28199226

Start: 1567642

End: 1568004

Strand: Reverse

Name: hicB

Synonym: PD1342

Alternate gene names: NA

Gene position: 1568004-1567642 (Counterclockwise)

Preceding gene: 28199227

Following gene: 28199223

Centisome position: 62.23

GC content: 44.35

Gene sequence:

>363_bases
TTGGTTGAAATCGAACGGAGTTACACCATGAAGAACATCATGACTATTGAGAGCTTTAAAGCCATCATTACCTATGATCC
GGAGATCGACATGTTTCGCGGTGAATTTGTGGGTATCAATGGTGGTGCTGATTTCTATGCAAAAGACCTTAAGGGTCTTC
GTCGAGAAGGAGCTATTTCTCTGAAGGTATTTTTGGAAGCCTGCAAAGAAGATAGCGTGGAACCACGTAAATGCTACTCA
GGGAAGTTCAATGCAAGGATTTCTCCTGAACTGCATGCTTTGGCTTCTGAAGCCGCAGCAGCACAGGGCATCAGTTTGAA
CCAATTTGTAGAACAAGCGATTCAGCATGAAGTCCACACCTGA

Upstream 100 bases:

>100_bases
GTTCTCGTATGTTGGTGCGACTGTTCGGTGAACGTCGGATATTCCACCGGCCCCACCCTTCTCCTAACACTGACAAGGGT
GCTGTTGAATCAATCCGAGC

Downstream 100 bases:

>100_bases
TAAAAGAAATTCTCCTTCATTATTTTGTACGTGTAAGCCGTCCTAGAAATAAGTCGTTCCATACCCATGTGATGTGTTTT
ATTGGACTGGAGCGTAGTGC

Product: HicB-related protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MVEIERSYTMKNIMTIESFKAIITYDPEIDMFRGEFVGINGGADFYAKDLKGLRREGAISLKVFLEACKEDSVEPRKCYS
GKFNARISPELHALASEAAAAQGISLNQFVEQAIQHEVHT

Sequences:

>Translated_120_residues
MVEIERSYTMKNIMTIESFKAIITYDPEIDMFRGEFVGINGGADFYAKDLKGLRREGAISLKVFLEACKEDSVEPRKCYS
GKFNARISPELHALASEAAAAQGISLNQFVEQAIQHEVHT
>Mature_120_residues
MVEIERSYTMKNIMTIESFKAIITYDPEIDMFRGEFVGINGGADFYAKDLKGLRREGAISLKVFLEACKEDSVEPRKCYS
GKFNARISPELHALASEAAAAQGISLNQFVEQAIQHEVHT

Specific function: Unknown

COG id: COG4226

COG function: function code S; Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13433; Mature: 13433

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIERSYTMKNIMTIESFKAIITYDPEIDMFRGEFVGINGGADFYAKDLKGLRREGAIS
CEECCCCHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH
LKVFLEACKEDSVEPRKCYSGKFNARISPELHALASEAAAAQGISLNQFVEQAIQHEVHT
HHHHHHHHHCCCCCCHHHCCCCCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEIERSYTMKNIMTIESFKAIITYDPEIDMFRGEFVGINGGADFYAKDLKGLRREGAIS
CEECCCCHHHHHHHHHHHCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHH
LKVFLEACKEDSVEPRKCYSGKFNARISPELHALASEAAAAQGISLNQFVEQAIQHEVHT
HHHHHHHHHCCCCCCHHHCCCCCCCEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA