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The map label for this gene is 28199076

Identifier: 28199076

GI number: 28199076

Start: 1385671

End: 1386093

Strand: Reverse

Name: 28199076

Synonym: PD1186

Alternate gene names: NA

Gene position: 1386093-1385671 (Counterclockwise)

Preceding gene: 28199077

Following gene: 77747681

Centisome position: 55.01

GC content: 59.1

Gene sequence:

>423_bases
ATGAACAATGAACATCGTTTTGAAATAGATGGCATCACCTACCTGATGACCCCGGCGAATGCGATGGCGGCCTGGCAATC
GCTCAAACGCGCCGGGGTGCTGCTGCGGGGGATGGATGCGGACGCCCTGACCAACACCCAAGGCGCAGCCTCCGTTGCCC
TAGGGGCGATCCTGAGCCATCTGGGCGACCCTGCGGTCACTGAGATAGAAGCCTTGGTGTTCGAACAGACCGCGATCAAG
ACCCCCGATGGCACCACCTACCGGCTCAGCCCAGATCGGCTCAATGAGCACTTCAACACCCGCCGCACCCATCTGCTGCG
CGTCTTAATGGAAGGAGTGAAGTATCAATACAGCGATTTTTTCGCTGGCGGCATGGCGGCCTTCCAGGAGCTGATTCCCA
TGCCGAGCGCCGAGAAACAGTAA

Upstream 100 bases:

>100_bases
CCCCCCCAGGATTTACCCGGGGCGCCGGACACAATCCAGAAACCTGGACACTGGTGTTTGAAGTGATGGACATCACTCTA
GAAAAAGGCTTTGGCAACGC

Downstream 100 bases:

>100_bases
CCGACTGGTTTGTCTGGGCACCGATCATGCGCGGCTATTGCGATCTTGAACAACTGCGCACCGTGTACTGCCTCAGTGAC
TTATGTACCTTCCACACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNNEHRFEIDGITYLMTPANAMAAWQSLKRAGVLLRGMDADALTNTQGAASVALGAILSHLGDPAVTEIEALVFEQTAIK
TPDGTTYRLSPDRLNEHFNTRRTHLLRVLMEGVKYQYSDFFAGGMAAFQELIPMPSAEKQ

Sequences:

>Translated_140_residues
MNNEHRFEIDGITYLMTPANAMAAWQSLKRAGVLLRGMDADALTNTQGAASVALGAILSHLGDPAVTEIEALVFEQTAIK
TPDGTTYRLSPDRLNEHFNTRRTHLLRVLMEGVKYQYSDFFAGGMAAFQELIPMPSAEKQ
>Mature_140_residues
MNNEHRFEIDGITYLMTPANAMAAWQSLKRAGVLLRGMDADALTNTQGAASVALGAILSHLGDPAVTEIEALVFEQTAIK
TPDGTTYRLSPDRLNEHFNTRRTHLLRVLMEGVKYQYSDFFAGGMAAFQELIPMPSAEKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1186_XYLFT (Q87CA2)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_779390.1
- STRING:   Q87CA2
- GeneID:   1143908
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD1186
- eggNOG:   NOG120063
- HOGENOM:   HBG756194
- OMA:   EGLTYLM
- ProtClustDB:   CLSK215934
- BioCyc:   XFAS183190:PD_1186-MONOMER
- InterPro:   IPR020351
- ProDom:   PD298513

Pfam domain/function: PF10876 DUF2669

EC number: NA

Molecular weight: Translated: 15429; Mature: 15429

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNEHRFEIDGITYLMTPANAMAAWQSLKRAGVLLRGMDADALTNTQGAASVALGAILSH
CCCCCEEEECCEEEEECCHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCHHHHHHHHHHHH
LGDPAVTEIEALVFEQTAIKTPDGTTYRLSPDRLNEHFNTRRTHLLRVLMEGVKYQYSDF
HCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGGMAAFQELIPMPSAEKQ
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNNEHRFEIDGITYLMTPANAMAAWQSLKRAGVLLRGMDADALTNTQGAASVALGAILSH
CCCCCEEEECCEEEEECCHHHHHHHHHHHHHCHHHCCCCCHHHCCCCCHHHHHHHHHHHH
LGDPAVTEIEALVFEQTAIKTPDGTTYRLSPDRLNEHFNTRRTHLLRVLMEGVKYQYSDF
HCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGGMAAFQELIPMPSAEKQ
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12533478