Click here to switch to the map view.

The map label for this gene is 28199063

Identifier: 28199063

GI number: 28199063

Start: 1376468

End: 1377712

Strand: Reverse

Name: 28199063

Synonym: PD1173

Alternate gene names: NA

Gene position: 1377712-1376468 (Counterclockwise)

Preceding gene: 28199064

Following gene: 28199059

Centisome position: 54.68

GC content: 55.42

Gene sequence:

>1245_bases
ATGACAGAACACTACTTCCGTACCCCCTTTGCCCACCAAGGGGACATGATCCACGTGCCCGAAGCCAAAGACAGTCACGG
CTTTGTCAGCTACACCCAAGGATGGGGGCCGGATTATCAAAAAGATTTAACCAAGGAGCCGACGGCTAAACCCGTAGAAC
GCACCGTCATGAATGCCGTGCTGCACGCCATCACCACGGTGCTTAAAGGCTACCAGGAATACGGCAGCCCTGAATTCATC
ACCGCCGAACAGAATAACGGCACGCCATTTTCATACATGCGTGGGGTGATCGTCCGATACCGCCCGGATCACGCAAGCCG
TTACGGGCTGTATCTGTCCACGGCTGACAACAACACCGATACACCGCTACAGAATGAACCCAACCGCTGGACGGCACTCT
CCAGGTACGAGCCTGGACAGATTGTCTACACCGCAGGCAAACGCGCCTTACCCGGCACCCTGTTGTGTGATGGCCGCGCT
GTATCGCGTGCCATGTACCCACGCCTGTTTGAGGAAATCAACACCAGTTATGGTGCCGGTGATGGTGTCAGCACCTTCAA
CATTCCCAATTTTCTTGAAGGCACCGTCGGCGTTCACACCGCCGACCCTGCCTTGGTCGGCACCTTCACCAGCGGGCAGG
TGATCTCCCATGCGCACACCGCGACGGCCGAGGAGGGCGGTAGGCATCTCCATCCTGTCACAGTCCATCCCGCAGGCCGC
CATACACACCCTGCCAGCGCAGCAGCGGCGGGCAATCATCTACACCAGGCATGGAGCGACGAACAAGGATTGCACCAGCA
TACAGGCAGCACCTCTTGGGACGGTGACCACGCGCATATCTTGGGTTCTTTCAGAGCGATCTATGCCTCTGGAAGAGACA
TGGGTTTTTATGAGCAAAATCAAGGCAAAGTCACGACCAATGTCACTGGCGGGCATCTACACAGATTCACCACCGATGCA
AACGGCAAGCATGCCCATAACATCAGCATGCAGGCCGCAGGGTTTCATGTGCATGACATTGCTGTAACAGCAGAGGCAGA
TCATGCTCACGCGGCAACAGCCGAATCGGCAGGCAGGCATGGCCACACTGTGTCCATTGATCGCTTTGGAGAACACCACA
ACCTGCCCGCTGGACTGCGCGTCATGGCGTGTTTAGTCGTTTTGATTGATTATTGTTTATTAAAGAACATTGATTATGAG
GATGTTGCATCGTGGCTGGTGGGTGGCGGGCAATTGTATTTTTGA

Upstream 100 bases:

>100_bases
GGTTCGCTACAACCTTGTGACGCATCTGCCCTTCGGATACGAGCGCAGCAATCGTAACTACACACACGGCACCTTTGGCG
ACCCACCCGAGCGATAACCC

Downstream 100 bases:

>100_bases
TCTGGATGCACGCACTGAATCATAGGCGTTGGTGAGTGGCATTGCCCCACGATATGTGGCGGTGAAGGTCCGTTTTTTGT
GGTTGCTTTTGCTGTGCTGA

Product: phage-related tail fiber protein

Products: NA

Alternate protein names: Phage Tail Collar Domain Family; Tail Collar Domain-Containing Protein; Phage Tail Fiber Protein; Phage Related-Protein; Ig-Like Domain-Containing Protein; Phage Tail Protein

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTEHYFRTPFAHQGDMIHVPEAKDSHGFVSYTQGWGPDYQKDLTKEPTAKPVERTVMNAVLHAITTVLKGYQEYGSPEFI
TAEQNNGTPFSYMRGVIVRYRPDHASRYGLYLSTADNNTDTPLQNEPNRWTALSRYEPGQIVYTAGKRALPGTLLCDGRA
VSRAMYPRLFEEINTSYGAGDGVSTFNIPNFLEGTVGVHTADPALVGTFTSGQVISHAHTATAEEGGRHLHPVTVHPAGR
HTHPASAAAAGNHLHQAWSDEQGLHQHTGSTSWDGDHAHILGSFRAIYASGRDMGFYEQNQGKVTTNVTGGHLHRFTTDA
NGKHAHNISMQAAGFHVHDIAVTAEADHAHAATAESAGRHGHTVSIDRFGEHHNLPAGLRVMACLVVLIDYCLLKNIDYE
DVASWLVGGGQLYF

Sequences:

>Translated_414_residues
MTEHYFRTPFAHQGDMIHVPEAKDSHGFVSYTQGWGPDYQKDLTKEPTAKPVERTVMNAVLHAITTVLKGYQEYGSPEFI
TAEQNNGTPFSYMRGVIVRYRPDHASRYGLYLSTADNNTDTPLQNEPNRWTALSRYEPGQIVYTAGKRALPGTLLCDGRA
VSRAMYPRLFEEINTSYGAGDGVSTFNIPNFLEGTVGVHTADPALVGTFTSGQVISHAHTATAEEGGRHLHPVTVHPAGR
HTHPASAAAAGNHLHQAWSDEQGLHQHTGSTSWDGDHAHILGSFRAIYASGRDMGFYEQNQGKVTTNVTGGHLHRFTTDA
NGKHAHNISMQAAGFHVHDIAVTAEADHAHAATAESAGRHGHTVSIDRFGEHHNLPAGLRVMACLVVLIDYCLLKNIDYE
DVASWLVGGGQLYF
>Mature_413_residues
TEHYFRTPFAHQGDMIHVPEAKDSHGFVSYTQGWGPDYQKDLTKEPTAKPVERTVMNAVLHAITTVLKGYQEYGSPEFIT
AEQNNGTPFSYMRGVIVRYRPDHASRYGLYLSTADNNTDTPLQNEPNRWTALSRYEPGQIVYTAGKRALPGTLLCDGRAV
SRAMYPRLFEEINTSYGAGDGVSTFNIPNFLEGTVGVHTADPALVGTFTSGQVISHAHTATAEEGGRHLHPVTVHPAGRH
THPASAAAAGNHLHQAWSDEQGLHQHTGSTSWDGDHAHILGSFRAIYASGRDMGFYEQNQGKVTTNVTGGHLHRFTTDAN
GKHAHNISMQAAGFHVHDIAVTAEADHAHAATAESAGRHGHTVSIDRFGEHHNLPAGLRVMACLVVLIDYCLLKNIDYED
VASWLVGGGQLYF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45221; Mature: 45089

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHYFRTPFAHQGDMIHVPEAKDSHGFVSYTQGWGPDYQKDLTKEPTAKPVERTVMNAV
CCCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHH
LHAITTVLKGYQEYGSPEFITAEQNNGTPFSYMRGVIVRYRPDHASRYGLYLSTADNNTD
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCEEEEECCCCCCEEEEEEEECCCCCC
TPLQNEPNRWTALSRYEPGQIVYTAGKRALPGTLLCDGRAVSRAMYPRLFEEINTSYGAG
CCCCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCC
DGVSTFNIPNFLEGTVGVHTADPALVGTFTSGQVISHAHTATAEEGGRHLHPVTVHPAGR
CCCCCCCCCCHHCCCCCEEECCCCEEEECCCCCEEHHHHHHHHHCCCCEECEEEECCCCC
HTHPASAAAAGNHLHQAWSDEQGLHQHTGSTSWDGDHAHILGSFRAIYASGRDMGFYEQN
CCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHEEECCCCCCCEECC
QGKVTTNVTGGHLHRFTTDANGKHAHNISMQAAGFHVHDIAVTAEADHAHAATAESAGRH
CCEEEEEECCCEEEEEECCCCCCEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHCCCC
GHTVSIDRFGEHHNLPAGLRVMACLVVLIDYCLLKNIDYEDVASWLVGGGQLYF
CCEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECC
>Mature Secondary Structure 
TEHYFRTPFAHQGDMIHVPEAKDSHGFVSYTQGWGPDYQKDLTKEPTAKPVERTVMNAV
CCCCCCCCCCCCCCEEECCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCHHHHHHHHHH
LHAITTVLKGYQEYGSPEFITAEQNNGTPFSYMRGVIVRYRPDHASRYGLYLSTADNNTD
HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCEEEEECCCCCCEEEEEEEECCCCCC
TPLQNEPNRWTALSRYEPGQIVYTAGKRALPGTLLCDGRAVSRAMYPRLFEEINTSYGAG
CCCCCCCCCEEEECCCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCC
DGVSTFNIPNFLEGTVGVHTADPALVGTFTSGQVISHAHTATAEEGGRHLHPVTVHPAGR
CCCCCCCCCCHHCCCCCEEECCCCEEEECCCCCEEHHHHHHHHHCCCCEECEEEECCCCC
HTHPASAAAAGNHLHQAWSDEQGLHQHTGSTSWDGDHAHILGSFRAIYASGRDMGFYEQN
CCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHEEECCCCCCCEECC
QGKVTTNVTGGHLHRFTTDANGKHAHNISMQAAGFHVHDIAVTAEADHAHAATAESAGRH
CCEEEEEECCCEEEEEECCCCCCEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHCCCC
GHTVSIDRFGEHHNLPAGLRVMACLVVLIDYCLLKNIDYEDVASWLVGGGQLYF
CCEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA