Definition | Xylella fastidiosa Temecula1, complete genome. |
---|---|
Accession | NC_004556 |
Length | 2,519,802 |
Click here to switch to the map view.
The map label for this gene is 28199014
Identifier: 28199014
GI number: 28199014
Start: 1315733
End: 1315981
Strand: Reverse
Name: 28199014
Synonym: PD1122
Alternate gene names: NA
Gene position: 1315981-1315733 (Counterclockwise)
Preceding gene: 28199033
Following gene: 28199012
Centisome position: 52.23
GC content: 46.18
Gene sequence:
>249_bases TTGAAGTGCCTAACCAGGCCCTTTGGAGGCCCTGTGGAAATTGATCTAAGCCCTGCTGATCGAAAAATGTTTGAGCAATA CACACAAATCTATGGACTGGCTTGCGTTGATGAAGCGGTAGAACACGCTGCAAAACAAGCACTAAAGGACGCTTATCTGC TACGGGCCAAGAATGGGCATTCGCCTCTTGAAGAAGGCGTGGTGATTTATTTGAAGGGACTTAAAAAGCCCTCAAGGAAT CAAGAATGA
Upstream 100 bases:
>100_bases CTCAGTACAACGGGATGCAACCGGCGGCGTTAGTTCGTGAACTGGCGTTATCGGTAGTAACTGCTGCGGTAAAGAATGAT AAGCGGCAAGCAGACGCAGC
Downstream 100 bases:
>100_bases AAGCAAGCGATGACACCGTGAGCTTGACCCGTATGAATGACCGTAAGAGGAAAGGTTGATATGTATATCTCAGTGGCTCC CTTTGATAACCCTGTAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MKCLTRPFGGPVEIDLSPADRKMFEQYTQIYGLACVDEAVEHAAKQALKDAYLLRAKNGHSPLEEGVVIYLKGLKKPSRN QE
Sequences:
>Translated_82_residues MKCLTRPFGGPVEIDLSPADRKMFEQYTQIYGLACVDEAVEHAAKQALKDAYLLRAKNGHSPLEEGVVIYLKGLKKPSRN QE >Mature_82_residues MKCLTRPFGGPVEIDLSPADRKMFEQYTQIYGLACVDEAVEHAAKQALKDAYLLRAKNGHSPLEEGVVIYLKGLKKPSRN QE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9177; Mature: 9177
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCLTRPFGGPVEIDLSPADRKMFEQYTQIYGLACVDEAVEHAAKQALKDAYLLRAKNGH CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SPLEEGVVIYLKGLKKPSRNQE CCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MKCLTRPFGGPVEIDLSPADRKMFEQYTQIYGLACVDEAVEHAAKQALKDAYLLRAKNGH CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SPLEEGVVIYLKGLKKPSRNQE CCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA