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The map label for this gene is nohA [C]

Identifier: 28199002

GI number: 28199002

Start: 1306975

End: 1307550

Strand: Reverse

Name: nohA [C]

Synonym: PD1110

Alternate gene names: 28199002

Gene position: 1307550-1306975 (Counterclockwise)

Preceding gene: 28199003

Following gene: 28199001

Centisome position: 51.89

GC content: 54.69

Gene sequence:

>576_bases
GTGCGTGGTGTTTTGATTCTCACTTGTTGTTTATATCGACCGATGGTTTTACAGAAACAGCAAGGAAAACAGGTTAATCG
TGCAGGCCTTTCGGAGATATTCGGTGTAGCGTTGCCGACGGTTGATCAATGGGCACGTAACGGCTGCCCAGTCGTGAAAC
GCGGTGGACGTGGGCGGGAATGGACGTTTGACACGGCTGTAGTCGCCCGCTGGTTACGTGACAAAGCCGCAGAAGAAGCG
GCGGGTGGGGCGGTGGCCGATATTGAAGAATGGAAGCGCCGTAAGATCGCCGCTGAAGCGCAACGCGAAGAGTTGCACTT
GGCCGATGCAAAAAAGCAGGTTGCTCCTTTGGAGCAGGTGGAAAAGACATTGGCCCGCGTATTCGCGGAAGTGCGTGCCA
ACCTACGCACTATTCCAGGGCGGACCGTCGCCCTCCTACTGGGTGAAACCGACGAGCGCCGATACAAACGCGTACTGCTG
CAAGAAATCGACCAAACCTTAGAAAATCTCGCGTCCTTAGACCTAACCCAAGAAGACACGGACTCCGACGAAGACGAGGA
AACAGACGATGTCTGA

Upstream 100 bases:

>100_bases
AAGCGTCAAATGAGCGAATTTAGCTGCAATTTGACAGATTTTCACGGGTCCTTCCTGATGTGGGAGGCCTGCGGGGTCGA
AACTCCGCGGGGCTTCCATT

Downstream 100 bases:

>100_bases
AACCTTAGGTATAGCCGCCCTAGAAAACCAAGAAGGCGTTGATCAGATGATCAGCAACGCCTTACAGATGCTGCGACCGC
CCCCAGCAATGAAGCCTTCC

Product: phage-related packaging protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRGVLILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEA
AGGAVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLL
QEIDQTLENLASLDLTQEDTDSDEDEETDDV

Sequences:

>Translated_191_residues
MRGVLILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEA
AGGAVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLL
QEIDQTLENLASLDLTQEDTDSDEDEETDDV
>Mature_191_residues
MRGVLILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGREWTFDTAVVARWLRDKAAEEA
AGGAVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLL
QEIDQTLENLASLDLTQEDTDSDEDEETDDV

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21498; Mature: 21498

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGVLILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGRE
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCC
WTFDTAVVARWLRDKAAEEAAGGAVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQV
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLDLTQEDT
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DSDEDEETDDV
CCCCCCCCCCC
>Mature Secondary Structure
MRGVLILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCPVVKRGGRGRE
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCCCEECCCCCCCC
WTFDTAVVARWLRDKAAEEAAGGAVADIEEWKRRKIAAEAQREELHLADAKKQVAPLEQV
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
EKTLARVFAEVRANLRTIPGRTVALLLGETDERRYKRVLLQEIDQTLENLASLDLTQEDT
HHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DSDEDEETDDV
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA