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The map label for this gene is 28199001

Identifier: 28199001

GI number: 28199001

Start: 1305030

End: 1306982

Strand: Reverse

Name: 28199001

Synonym: PD1109

Alternate gene names: NA

Gene position: 1306982-1305030 (Counterclockwise)

Preceding gene: 28199002

Following gene: 28199000

Centisome position: 51.87

GC content: 58.17

Gene sequence:

>1953_bases
ATGTCTGAAACCTTAGGTATAGCCGCCCTAGAAAACCAAGAAGGCGTTGATCAGATGATCAGCAACGCCTTACAGATGCT
GCGACCGCCCCCAGCAATGAAGCCTTCCGAATGGGCACAGACACGCATCCGCATTCCTGAAGGCAACGCCATTCCAGGCC
CCTTGCGCCTAGACAACGCCCCCTACCAACGCGAACCCATGGATATGCTGGTGGACCCGGACTGCTACCGCGTCACCCTG
AAATGGGGCGCACAAGTCGGTAAAACCATGCTGGCCTTATGCGTACAAGGCTACTGCATCGAAATGGCCCCCCGCAGCCA
AATGATGCTGCAACCCTCCCAAGGTGATTTACAAGCCTGGTTAGAAACCAAATTCTCCCCGCTGATTGCAGCCAACCAAG
GATTGCAACGCCTGATTGCAAAACCGCGTGGCCGCGATGGCGTCAACAACCAGCGGATGAAATCCTACCCTGGAGGATTT
CTGATGTTTGCCTGGTCCGGCTCACCAAAGACCATGCGCGGGCGCTCAGCACCACTGATTGTGTGCGACGAAATAGACGG
CTACGAACGCACGGACGAAGGCCACCCGGTGAGCCTGTTGTGGCAGCGCGCCGCGACCTTTGGTGACGAACGGTTTCTTC
TGGAGATCAGCACACCCACCATTGAAGGTGCCAGCTATATTGATGACGCCTACCGAGCCGGAGACCAGAGGCGATTTTAC
GTACGCTGCCCCGCCTGCGGATGCGAACAAACCCTAGAATGGGAACACGTCAGCTGGGTTGGACGCCAAAGCGACCCCGA
CGCCGACTTGGCCGCTATCGACGCCCACCAACCGCACACTGCACGCTACGTCTGCCAAGGGTGCGGCGTATGCTGGGATG
ACGGCCAACGCATTGCAGCCGTTCGCCAAGCCCACTGGCAAGCCAGCAAACCCTTTAACGGCCATGCCTCCTACGAACTG
AACGAACTGTACTCCACCTTCCGCCGCCAAAGCGCCATCGTTCAAGACTACCTGGACAAACTCAAACACCAGGACCTACA
AACATTCACCAACGTCAGCCTGGCCCGCGTCTGGAGCGAGACCGCCGAACAGGCCGACATGGATGACCTACTGCGCCGCC
TTGAAACCTACCTTGCTGATGTCCCTATGGGCGGTGTCTTTCTCACTGCGGGCATCGACATGCAAACCGACCGCCTTGAA
GTGGAAATTGTCGCATGGGGCATTGACGAAGAATCCTGGTCCATCCATACCGCCGTTCTCTACGGCGACCCCCTCTTAGG
CGACGTCTGGGACGCACTGGACCGCTACCTCTCTACCACCTGGCAGCACGAAAGCGGCCTACGTCTCCCCATCCAGGCCG
CCTGCTTAGATACCGGAGGCACCTGCGGCTACACCCAAGCCGCTTACCAATACCTGCGTACCAGGACAGGCGGACGCGTC
TTTGGCATTAAAGGCGTTGGCGGCTGGGGCCGTCCCATCGTAGACAAAGCACAACGCAAACATTCCGGACGCAACGCACC
CAGAATCAACCTCTTTACCGTTGGCGTGGACGAAGCAAAATTAATTGTGATGCGCCGCCTCGCCATCACCCAGCCTGGCC
CAGGCTACTCCCATTTCCCCACAGACCGCTCCCCCGACTGGTTTGCACAACTGACCGCTGAAAAATTGCGTACCCGCTAC
CTCAAAGGCCAGCCAATACGCCAATGGACCAAACCCGACAAAACCCCCAACGAAGCATTGGATTGCCGCGTCTACGCCTA
CGCCGCCCTCAAAATCATCAACCCGCATCTACCCCATGACGCAAAGCGTATTAAAGATGCCGCCGCCTTACTACCCAAGG
AAAAACTGCCACAGGACCCCACCCCAGAAGTGCAACACCATACCCCCCATCTTCGCCCCCAACGTCCCCGGCCCCCCTTA
AGACGCCGGAGAACATGGGCTAACGACTGGTGA

Upstream 100 bases:

>100_bases
CGCGTACTGCTGCAAGAAATCGACCAAACCTTAGAAAATCTCGCGTCCTTAGACCTAACCCAAGAAGACACGGACTCCGA
CGAAGACGAGGAAACAGACG

Downstream 100 bases:

>100_bases
CCCATGACATTCCAGCACACCTGCCCAACATTCCCTGCCAAGATCAATGCTGGATGCTCATTACAGATATCCCTTGCACT
CAAAGACTACCCCTGGCCCG

Product: phage-related terminase large subunit

Products: NA

Alternate protein names: Phage Terminase Large Subunit; Terminase GpA; Terminase Large Subunit; Bacteriophage Tail Assembly Protein; Prophage LambdaW1 Terminase Large Subunit; Bacteriophage Tail Assembly Protein-Like Protein; Phage-Related Terminase Large Subunit; Prophage; DNA Packaging R; Bacteriophage Terminase Large Subunit; Large Subunit Of DNA Packaging Dimer; Phage Terminase GpA Family Protein; Terminase Gpa; Terminase Large Subunit Of Phage Lambda; DNA Packaging Protein; DNA Packaging Protein Of Prophage

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MSETLGIAALENQEGVDQMISNALQMLRPPPAMKPSEWAQTRIRIPEGNAIPGPLRLDNAPYQREPMDMLVDPDCYRVTL
KWGAQVGKTMLALCVQGYCIEMAPRSQMMLQPSQGDLQAWLETKFSPLIAANQGLQRLIAKPRGRDGVNNQRMKSYPGGF
LMFAWSGSPKTMRGRSAPLIVCDEIDGYERTDEGHPVSLLWQRAATFGDERFLLEISTPTIEGASYIDDAYRAGDQRRFY
VRCPACGCEQTLEWEHVSWVGRQSDPDADLAAIDAHQPHTARYVCQGCGVCWDDGQRIAAVRQAHWQASKPFNGHASYEL
NELYSTFRRQSAIVQDYLDKLKHQDLQTFTNVSLARVWSETAEQADMDDLLRRLETYLADVPMGGVFLTAGIDMQTDRLE
VEIVAWGIDEESWSIHTAVLYGDPLLGDVWDALDRYLSTTWQHESGLRLPIQAACLDTGGTCGYTQAAYQYLRTRTGGRV
FGIKGVGGWGRPIVDKAQRKHSGRNAPRINLFTVGVDEAKLIVMRRLAITQPGPGYSHFPTDRSPDWFAQLTAEKLRTRY
LKGQPIRQWTKPDKTPNEALDCRVYAYAALKIINPHLPHDAKRIKDAAALLPKEKLPQDPTPEVQHHTPHLRPQRPRPPL
RRRRTWANDW

Sequences:

>Translated_650_residues
MSETLGIAALENQEGVDQMISNALQMLRPPPAMKPSEWAQTRIRIPEGNAIPGPLRLDNAPYQREPMDMLVDPDCYRVTL
KWGAQVGKTMLALCVQGYCIEMAPRSQMMLQPSQGDLQAWLETKFSPLIAANQGLQRLIAKPRGRDGVNNQRMKSYPGGF
LMFAWSGSPKTMRGRSAPLIVCDEIDGYERTDEGHPVSLLWQRAATFGDERFLLEISTPTIEGASYIDDAYRAGDQRRFY
VRCPACGCEQTLEWEHVSWVGRQSDPDADLAAIDAHQPHTARYVCQGCGVCWDDGQRIAAVRQAHWQASKPFNGHASYEL
NELYSTFRRQSAIVQDYLDKLKHQDLQTFTNVSLARVWSETAEQADMDDLLRRLETYLADVPMGGVFLTAGIDMQTDRLE
VEIVAWGIDEESWSIHTAVLYGDPLLGDVWDALDRYLSTTWQHESGLRLPIQAACLDTGGTCGYTQAAYQYLRTRTGGRV
FGIKGVGGWGRPIVDKAQRKHSGRNAPRINLFTVGVDEAKLIVMRRLAITQPGPGYSHFPTDRSPDWFAQLTAEKLRTRY
LKGQPIRQWTKPDKTPNEALDCRVYAYAALKIINPHLPHDAKRIKDAAALLPKEKLPQDPTPEVQHHTPHLRPQRPRPPL
RRRRTWANDW
>Mature_649_residues
SETLGIAALENQEGVDQMISNALQMLRPPPAMKPSEWAQTRIRIPEGNAIPGPLRLDNAPYQREPMDMLVDPDCYRVTLK
WGAQVGKTMLALCVQGYCIEMAPRSQMMLQPSQGDLQAWLETKFSPLIAANQGLQRLIAKPRGRDGVNNQRMKSYPGGFL
MFAWSGSPKTMRGRSAPLIVCDEIDGYERTDEGHPVSLLWQRAATFGDERFLLEISTPTIEGASYIDDAYRAGDQRRFYV
RCPACGCEQTLEWEHVSWVGRQSDPDADLAAIDAHQPHTARYVCQGCGVCWDDGQRIAAVRQAHWQASKPFNGHASYELN
ELYSTFRRQSAIVQDYLDKLKHQDLQTFTNVSLARVWSETAEQADMDDLLRRLETYLADVPMGGVFLTAGIDMQTDRLEV
EIVAWGIDEESWSIHTAVLYGDPLLGDVWDALDRYLSTTWQHESGLRLPIQAACLDTGGTCGYTQAAYQYLRTRTGGRVF
GIKGVGGWGRPIVDKAQRKHSGRNAPRINLFTVGVDEAKLIVMRRLAITQPGPGYSHFPTDRSPDWFAQLTAEKLRTRYL
KGQPIRQWTKPDKTPNEALDCRVYAYAALKIINPHLPHDAKRIKDAAALLPKEKLPQDPTPEVQHHTPHLRPQRPRPPLR
RRRTWANDW

Specific function: Unknown

COG id: COG5525

COG function: function code R; Bacteriophage tail assembly protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73424; Mature: 73293

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETLGIAALENQEGVDQMISNALQMLRPPPAMKPSEWAQTRIRIPEGNAIPGPLRLDNA
CCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCEEECCC
PYQREPMDMLVDPDCYRVTLKWGAQVGKTMLALCVQGYCIEMAPRSQMMLQPSQGDLQAW
CCCCCCCHHEECCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHH
LETKFSPLIAANQGLQRLIAKPRGRDGVNNQRMKSYPGGFLMFAWSGSPKTMRGRSAPLI
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCEE
VCDEIDGYERTDEGHPVSLLWQRAATFGDERFLLEISTPTIEGASYIDDAYRAGDQRRFY
EEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEE
VRCPACGCEQTLEWEHVSWVGRQSDPDADLAAIDAHQPHTARYVCQGCGVCWDDGQRIAA
EECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEECCCCHHHH
VRQAHWQASKPFNGHASYELNELYSTFRRQSAIVQDYLDKLKHQDLQTFTNVSLARVWSE
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEQADMDDLLRRLETYLADVPMGGVFLTAGIDMQTDRLEVEIVAWGIDEESWSIHTAVL
HHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEE
YGDPLLGDVWDALDRYLSTTWQHESGLRLPIQAACLDTGGTCGYTQAAYQYLRTRTGGRV
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEE
FGIKGVGGWGRPIVDKAQRKHSGRNAPRINLFTVGVDEAKLIVMRRLAITQPGPGYSHFP
EEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
TDRSPDWFAQLTAEKLRTRYLKGQPIRQWTKPDKTPNEALDCRVYAYAALKIINPHLPHD
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHCEEEEEEEHHHHHCCCCCCH
AKRIKDAAALLPKEKLPQDPTPEVQHHTPHLRPQRPRPPLRRRRTWANDW
HHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SETLGIAALENQEGVDQMISNALQMLRPPPAMKPSEWAQTRIRIPEGNAIPGPLRLDNA
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCEEECCC
PYQREPMDMLVDPDCYRVTLKWGAQVGKTMLALCVQGYCIEMAPRSQMMLQPSQGDLQAW
CCCCCCCHHEECCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCHHHHH
LETKFSPLIAANQGLQRLIAKPRGRDGVNNQRMKSYPGGFLMFAWSGSPKTMRGRSAPLI
HHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCEE
VCDEIDGYERTDEGHPVSLLWQRAATFGDERFLLEISTPTIEGASYIDDAYRAGDQRRFY
EEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEE
VRCPACGCEQTLEWEHVSWVGRQSDPDADLAAIDAHQPHTARYVCQGCGVCWDDGQRIAA
EECCCCCCCCCCCCHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEECCCCHHHH
VRQAHWQASKPFNGHASYELNELYSTFRRQSAIVQDYLDKLKHQDLQTFTNVSLARVWSE
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEQADMDDLLRRLETYLADVPMGGVFLTAGIDMQTDRLEVEIVAWGIDEESWSIHTAVL
HHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCEEEEEEE
YGDPLLGDVWDALDRYLSTTWQHESGLRLPIQAACLDTGGTCGYTQAAYQYLRTRTGGRV
ECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEE
FGIKGVGGWGRPIVDKAQRKHSGRNAPRINLFTVGVDEAKLIVMRRLAITQPGPGYSHFP
EEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
TDRSPDWFAQLTAEKLRTRYLKGQPIRQWTKPDKTPNEALDCRVYAYAALKIINPHLPHD
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHCEEEEEEEHHHHHCCCCCCH
AKRIKDAAALLPKEKLPQDPTPEVQHHTPHLRPQRPRPPLRRRRTWANDW
HHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA