Definition | Xylella fastidiosa Temecula1, complete genome. |
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Accession | NC_004556 |
Length | 2,519,802 |
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The map label for this gene is mtgA [H]
Identifier: 28198975
GI number: 28198975
Start: 1284009
End: 1284746
Strand: Reverse
Name: mtgA [H]
Synonym: PD1082
Alternate gene names: 28198975
Gene position: 1284746-1284009 (Counterclockwise)
Preceding gene: 28198978
Following gene: 28198974
Centisome position: 50.99
GC content: 50.54
Gene sequence:
>738_bases ATGGGGATGTATCAGTGGATTCAAAGAGATAGTGACGTCCATCAACGGTGGATCTGGTGCCGTCGTCTGCTCATAGTGTC GCTAGTGTCAGCGTTAATGAGTGTGTTACAGGTGATTGTTTTTCGGTTTGTCGATCCACCGTTGAGTATGACGATGGTGG GGCGTTACTTGGAAGCCTGGAGCGATAGGCAGTGGAATTTTCGTCTGCATTATGTCTGGTGTGATTTGGAGCAGATTGCA CCAAGTGTACCCATCTCGTTGGTTGCCGCTGAGGATCAGAGATTCCCTTTTCACCACGGTTTCGACTTTGATGCAATCAA GAAGGCACTTGGCCGTCACTCGCGTGGTGGGCATCTGCGTGGCGCCAGCACAATCAGTCAGCAGGTAGCAAAGAATCTGT TTCTCTGGAGTGGCCGCAGTTTCGTACGTAAGGGATTGGAAGGTTGGTACACGTTTTGGATCGAACTTTTTTGGCCTAAG CGTCGTATTTTAGAGATCTATGCCAACATTGCTGAGTTTGGTGATGGTGTGTATGGCGTGCAGGCTGCAGCACGGCGTTA CTTAGGCAAGGGCGCTGCTGATTTGGATGAGAGCGATGCGGCTCAACTGGCTGCGGTGTTGCCTTCGCCGCGACATTATA ATATTCAGCATCCCGGCCCTTATATACGGTGGCGAAGTTCATGGATTCAACGTCAAGCAAAACAGCTTGGCGGGTCGGCA TACCTTGATATGCATTAG
Upstream 100 bases:
>100_bases GCGCGTCAGGGAGTCGTGATCGGTCATGAGTTGATTGTCGAGAACGCCTGCTTGGAGATAGAAAGAGCAGATTTAAGTGT TCAATGGATGATGGGGAAGC
Downstream 100 bases:
>100_bases GATGCACTGGCGTTCGTTTTCTATATGCTTTGATGATGTGTCGCCGATTCCAAATTGGGCCATTGTTGGCCCTTGGTCGC TATACAACAGTTACGCAGCA
Product: monofunctional biosynthetic peptidoglycan transglycosylase
Products: NA
Alternate protein names: Monofunctional TGase [H]
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MGMYQWIQRDSDVHQRWIWCRRLLIVSLVSALMSVLQVIVFRFVDPPLSMTMVGRYLEAWSDRQWNFRLHYVWCDLEQIA PSVPISLVAAEDQRFPFHHGFDFDAIKKALGRHSRGGHLRGASTISQQVAKNLFLWSGRSFVRKGLEGWYTFWIELFWPK RRILEIYANIAEFGDGVYGVQAAARRYLGKGAADLDESDAAQLAAVLPSPRHYNIQHPGPYIRWRSSWIQRQAKQLGGSA YLDMH
Sequences:
>Translated_245_residues MGMYQWIQRDSDVHQRWIWCRRLLIVSLVSALMSVLQVIVFRFVDPPLSMTMVGRYLEAWSDRQWNFRLHYVWCDLEQIA PSVPISLVAAEDQRFPFHHGFDFDAIKKALGRHSRGGHLRGASTISQQVAKNLFLWSGRSFVRKGLEGWYTFWIELFWPK RRILEIYANIAEFGDGVYGVQAAARRYLGKGAADLDESDAAQLAAVLPSPRHYNIQHPGPYIRWRSSWIQRQAKQLGGSA YLDMH >Mature_244_residues GMYQWIQRDSDVHQRWIWCRRLLIVSLVSALMSVLQVIVFRFVDPPLSMTMVGRYLEAWSDRQWNFRLHYVWCDLEQIAP SVPISLVAAEDQRFPFHHGFDFDAIKKALGRHSRGGHLRGASTISQQVAKNLFLWSGRSFVRKGLEGWYTFWIELFWPKR RILEIYANIAEFGDGVYGVQAAARRYLGKGAADLDESDAAQLAAVLPSPRHYNIQHPGPYIRWRSSWIQRQAKQLGGSAY LDMH
Specific function: Cell wall formation [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 51 family [H]
Homologues:
Organism=Escherichia coli, GI1789601, Length=235, Percent_Identity=48.5106382978723, Blast_Score=209, Evalue=1e-55, Organism=Escherichia coli, GI87082258, Length=144, Percent_Identity=38.1944444444444, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1786343, Length=134, Percent_Identity=34.3283582089552, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788867, Length=136, Percent_Identity=33.8235294117647, Blast_Score=60, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001264 - InterPro: IPR011812 [H]
Pfam domain/function: PF00912 Transgly [H]
EC number: 2.4.2.- [C]
Molecular weight: Translated: 28438; Mature: 28307
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMYQWIQRDSDVHQRWIWCRRLLIVSLVSALMSVLQVIVFRFVDPPLSMTMVGRYLEAW CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SDRQWNFRLHYVWCDLEQIAPSVPISLVAAEDQRFPFHHGFDFDAIKKALGRHSRGGHLR CCCCCCEEEEEEEECHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCC GASTISQQVAKNLFLWSGRSFVRKGLEGWYTFWIELFWPKRRILEIYANIAEFGDGVYGV CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH QAAARRYLGKGAADLDESDAAQLAAVLPSPRHYNIQHPGPYIRWRSSWIQRQAKQLGGSA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE YLDMH EECCC >Mature Secondary Structure GMYQWIQRDSDVHQRWIWCRRLLIVSLVSALMSVLQVIVFRFVDPPLSMTMVGRYLEAW CHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SDRQWNFRLHYVWCDLEQIAPSVPISLVAAEDQRFPFHHGFDFDAIKKALGRHSRGGHLR CCCCCCEEEEEEEECHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCC GASTISQQVAKNLFLWSGRSFVRKGLEGWYTFWIELFWPKRRILEIYANIAEFGDGVYGV CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH QAAARRYLGKGAADLDESDAAQLAAVLPSPRHYNIQHPGPYIRWRSSWIQRQAKQLGGSA HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCE YLDMH EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA