Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
---|---|
Accession | NC_009079 |
Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is pmi [H]
Identifier: 262192843
GI number: 262192843
Start: 2058228
End: 2059430
Strand: Direct
Name: pmi [H]
Synonym: BMA10247_A2128
Alternate gene names: 262192843
Gene position: 2058228-2059430 (Clockwise)
Preceding gene: 126445930
Following gene: 126446989
Centisome position: 87.48
GC content: 71.4
Gene sequence:
>1203_bases ATGTTCGACGGCGGCGGCCCGCATGCTTTATCCTTGCCGCTCGGCGCCGCGCGTGCGGCGCTCGCGTTTCTTCCCCCGTC AACCGCGCCGCCATCCGTCATGTCCGCCCCCGTTTCCGTTTCCGACCAGGCCGCCCGATTGCGCCGCCACTTCGCGCAGA TCGTCTTGCCGATCTGGCGCGGGCCCGGCTTCAATCCGGCGCTGCAACTGCCGTTCGAGGCCGTCGCGCCGGACACGCAC GTGCCGCTGCCCGTCACCCGCTATCGCGCGATGGCGTGCGCGCGCCAGTTGTTCATATTCTCGCAGGCGGGCGACGCGCA GCACGCGCACGCGCTCTTTGCCGCATTGTGCCGTCACTTTCGCGATCCTCGCCACGACGGCTGGTTTTACAGTGTCGACG CGCAGGGCGCGCCGCTCGACCGCACGAAGGACCTGTACACGCATGCGTTCGTCGTGTTCGCATGCGCCGAGTATTTCGCG GCGTTCGGCAACCGCGACGCGCGCGAGCTCGCGCAACGCACGGCGGCGCTGATCGTCGATCGCTTCGCGCCTCGGCCGGG CAGCGCGCTGCTCGATTCCGCACGCGGCGAGGACTTCGCCGCGGCGGCGGGCGGCCCGTTGCAGAATCCGCTGATGCACC TGACCGAAGGCTGGCTCGCCGCCGGCCGCGCGTTCGGCGACACCGCGTTCGACGACGCGCTGCTGCGCACCGCGCAGGCG GTCGAGCGCACGTTCGTCGATCCGCACACCGGCTGCGTCGCGGAATTGCCGATCGGCTGCGCGGACAACCGCTTCGAGCC CGGCCATCAGTTCGAGTGGTTCTATCTCGTCGCCTCGGCGGGCGCGCGGCTCGCGGCGACCGGCCTGCCCGACGCGCTCG CGCGCGCGTACGCGTTCGCGCAACGGCACGGCGTCGATCCGGACACGGGCGGCGTCAGCGCGGCGACCGACGAGCGCGGC GCATGCGTCGACGGCACGCAGCGGATCTGGGCGCAAACCGAATATCTGCGCGCGCTCGCGACGCATGGCGGCGAGCCGGA CGCGCTCGCGCGCCAGATCGCGCGCTTTGCCGAGCGGTTCCTGCATCCGCGCGGCTGGTACGAATGCAAGACTGCGCAGG GCGAGGTATCGCGCGCGGACATGCCGTCGACGACGCCGTATCACCTCGCGACCGCGTACGCTTCGTTGCCGGCGGGGACG TGA
Upstream 100 bases:
>100_bases ACGACAGGCGCTCGCGCTCGATGCCGATCACGCTGCCGAGCGCCGCCGCGAGCATCAGCCGCATGATGAGTTCGACGTTA TTCAGCATTCGTGCTCTCCC
Downstream 100 bases:
>100_bases CGCACCGCGCGCCCGCGCCGCGTGCCGCGCGGAATCCGGCATCCCGCCGTAGCGCCGCCGCCGCGCGCCGCTCGCCCGTG CGCTAAAGCGCGGCCTGCCG
Product: N-acylglucosamine 2-epimerase
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTH VPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFA AFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERG ACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT
Sequences:
>Translated_400_residues MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTH VPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFA AFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERG ACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT >Mature_400_residues MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWRGPGFNPALQLPFEAVAPDTH VPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHFRDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFA AFGNRDARELAQRTAALIVDRFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFAQRHGVDPDTGGVSAATDERG ACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERFLHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT
Specific function: Unknown
COG id: COG2942
COG function: function code G; N-acyl-D-glucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 [H]
Pfam domain/function: PF07221 GlcNAc_2-epim [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 43034; Mature: 43034
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWR CCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHC GPGFNPALQLPFEAVAPDTHVPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHF CCCCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFAAFGNRDARELAQRTAALIVD CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA HCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHH VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFA HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHH QRHGVDPDTGGVSAATDERGACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERF HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MFDGGGPHALSLPLGAARAALAFLPPSTAPPSVMSAPVSVSDQAARLRRHFAQIVLPIWR CCCCCCCCEEECCCHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHC GPGFNPALQLPFEAVAPDTHVPLPVTRYRAMACARQLFIFSQAGDAQHAHALFAALCRHF CCCCCCCEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RDPRHDGWFYSVDAQGAPLDRTKDLYTHAFVVFACAEYFAAFGNRDARELAQRTAALIVD CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RFAPRPGSALLDSARGEDFAAAAGGPLQNPLMHLTEGWLAAGRAFGDTAFDDALLRTAQA HCCCCCCHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHH VERTFVDPHTGCVAELPIGCADNRFEPGHQFEWFYLVASAGARLAATGLPDALARAYAFA HHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHH QRHGVDPDTGGVSAATDERGACVDGTQRIWAQTEYLRALATHGGEPDALARQIARFAERF HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LHPRGWYECKTAQGEVSRADMPSTTPYHLATAYASLPAGT CCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1452036; 11481430 [H]