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The map label for this gene is nopC

Identifier: 255767012

GI number: 255767012

Start: 73210

End: 73506

Strand: Reverse

Name: nopC

Synonym: NGR_a00560

Alternate gene names: NA

Gene position: 73506-73210 (Counterclockwise)

Preceding gene: 16520048

Following gene: 255767011

Centisome position: 13.71

GC content: 59.26

Gene sequence:

>297_bases
ATGGTCGGAGTGATTGGAAGTGGAGTTGGCTCCATCGGCGTTTCCCTGGCCCGCAAAGGGGGGCATGGACATTCGACTGG
ACAGCCGCCGCGCGATTCAGGCGGGCCCTCTGGTCACAACAGGCCGGATCGCGGGAGCGGCGTTACGGATGGCCCGACCA
TTTCTGGGGATCGCTCGCAGGCTGCAATTCAAAGCGAAGCCTTCGAACTAGCTCTTCGATCGGTTGCGCTACAACTTATG
AACGATGCCATGGCTGATGCCGACGAAGCTATGGCAGAAACTGAAGAGGATGCCTGA

Upstream 100 bases:

>100_bases
ATGCAATAGCGCTTCTTTTTTTGACAATTGTCAGCTTTTCGAAAGCTGGAGCTCATAAGTAGATGTTATCTACAATTCGC
CGCTAAGGCAGGAGTAGCTG

Downstream 100 bases:

>100_bases
CGCTGGGTGGCCCCCGTCAGGAGGTGCGTGCCGTTAGTGACGGCACAATTGTAACAGAAAGGGAAATGACATGTCTAAAA
TAGGTACTCTCACGAGTGCA

Product: nodulation protein NopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MVGVIGSGVGSIGVSLARKGGHGHSTGQPPRDSGGPSGHNRPDRGSGVTDGPTISGDRSQAAIQSEAFELALRSVALQLM
NDAMADADEAMAETEEDA

Sequences:

>Translated_98_residues
MVGVIGSGVGSIGVSLARKGGHGHSTGQPPRDSGGPSGHNRPDRGSGVTDGPTISGDRSQAAIQSEAFELALRSVALQLM
NDAMADADEAMAETEEDA
>Mature_98_residues
MVGVIGSGVGSIGVSLARKGGHGHSTGQPPRDSGGPSGHNRPDRGSGVTDGPTISGDRSQAAIQSEAFELALRSVALQLM
NDAMADADEAMAETEEDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9830; Mature: 9830

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGVIGSGVGSIGVSLARKGGHGHSTGQPPRDSGGPSGHNRPDRGSGVTDGPTISGDRSQ
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
AAIQSEAFELALRSVALQLMNDAMADADEAMAETEEDA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
>Mature Secondary Structure
MVGVIGSGVGSIGVSLARKGGHGHSTGQPPRDSGGPSGHNRPDRGSGVTDGPTISGDRSQ
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
AAIQSEAFELALRSVALQLMNDAMADADEAMAETEEDA
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA