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The map label for this gene is nopP

Identifier: 16520048

GI number: 16520048

Start: 74205

End: 75020

Strand: Reverse

Name: nopP

Synonym: NGR_a00570

Alternate gene names: 16520048

Gene position: 75020-74205 (Counterclockwise)

Preceding gene: 16520047

Following gene: 255767012

Centisome position: 13.99

GC content: 52.21

Gene sequence:

>816_bases
ATGTACGGTCGAATTGATAGCTCGTCCGATTTCCATTACACGCAGAGTGCCAGCAAGCAAATGGATGCAGAAACCCAAGA
GTTCGCGGACACGTTTGCCCGAATGCACTTAGACAGGTCCAACGGCGGTTCATCGTCGGCGGCCAGATATACCCTCGATC
ACGAACCTCCGGTGGTGCCGATTGATCTCGAGACTTTCAGGAGGGAGATCAGGAAATTTCATGGCAAAGAAATCACTGAC
ATCGCCAACAATCCACAGGAATATTCAGACTTCGTGTCCGCAAAAGCCAGACGCACTGCGGACGTTGCTCAGCAATACGG
CATTCGTCGGGATTCTGAGAACGCTCGATATTTCAGTTACCAGTTGGGAAACCAGTGTGTTGGACTGATGAGAACGGAAG
GTGGGTTCAGCATGGAAGAAGAGTTCGAATCCAAAAGTTGGAGAGACCAATTTCCTGGTCACCAAGAGATTACCTCCACC
GTGGATCTTCAAGTCGCCCATCCTCTCGTTGAGAATGCAGGCGATATTCTGCTCGAGCACCAACTTCGGAGGGACGGCGA
ACGACCGTTGCTGAACTGGCGCGCGGAAAACCCAGAGGCGAAAGCCCGTGCAGCGATGATGGGGTTTGTTGAAGTGGATG
ATTGCGACATGGTCCTTGACCCCAAACAGCATCCCGACAAATGGACGCAGACCAGTGCCGCTGAATGGCGGCGTAAAGAC
AAACCGCCGCTCTATCTCCGCAAATTTGAGGATGCCGAAACCGCACAGTGTTCAACCAGCTGCTCTTACGAGACTTACGA
AGATGACTTCATGTGA

Upstream 100 bases:

>100_bases
CCCACTAGTCAGCTGAACGTCAGTTGTGCGCGTCTATCATCTTGACCCGTTTTCCCTACCAGTCGCTCTCAGTGCAAAAA
AATAGGAGTACAAGATCACC

Downstream 100 bases:

>100_bases
CCGGATTCTCGCCAGATTTGGTCGCGACGGCCGGCCCCATCTGCCAAGACCGGCCCTCATGTCACGGACAGGGAACGAAA
GAGCGTTACAAACTGCCACG

Product: nodulation protein NopP

Products: NA

Alternate protein names: Nodulation outer protein P

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MYGRIDSSSDFHYTQSASKQMDAETQEFADTFARMHLDRSNGGSSSAARYTLDHEPPVVPIDLETFRREIRKFHGKEITD
IANNPQEYSDFVSAKARRTADVAQQYGIRRDSENARYFSYQLGNQCVGLMRTEGGFSMEEEFESKSWRDQFPGHQEITST
VDLQVAHPLVENAGDILLEHQLRRDGERPLLNWRAENPEAKARAAMMGFVEVDDCDMVLDPKQHPDKWTQTSAAEWRRKD
KPPLYLRKFEDAETAQCSTSCSYETYEDDFM

Sequences:

>Translated_271_residues
MYGRIDSSSDFHYTQSASKQMDAETQEFADTFARMHLDRSNGGSSSAARYTLDHEPPVVPIDLETFRREIRKFHGKEITD
IANNPQEYSDFVSAKARRTADVAQQYGIRRDSENARYFSYQLGNQCVGLMRTEGGFSMEEEFESKSWRDQFPGHQEITST
VDLQVAHPLVENAGDILLEHQLRRDGERPLLNWRAENPEAKARAAMMGFVEVDDCDMVLDPKQHPDKWTQTSAAEWRRKD
KPPLYLRKFEDAETAQCSTSCSYETYEDDFM
>Mature_271_residues
MYGRIDSSSDFHYTQSASKQMDAETQEFADTFARMHLDRSNGGSSSAARYTLDHEPPVVPIDLETFRREIRKFHGKEITD
IANNPQEYSDFVSAKARRTADVAQQYGIRRDSENARYFSYQLGNQCVGLMRTEGGFSMEEEFESKSWRDQFPGHQEITST
VDLQVAHPLVENAGDILLEHQLRRDGERPLLNWRAENPEAKARAAMMGFVEVDDCDMVLDPKQHPDKWTQTSAAEWRRKD
KPPLYLRKFEDAETAQCSTSCSYETYEDDFM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Note=Secreted via type III secretion system (TTSS)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nopP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NOPP_RHISN (P55724)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444168.1
- GeneID:   962593
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00570
- HOGENOM:   HBG653708
- ProtClustDB:   CLSK516140
- GO:   GO:0009877

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31250; Mature: 31250

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGRIDSSSDFHYTQSASKQMDAETQEFADTFARMHLDRSNGGSSSAARYTLDHEPPVVP
CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEE
IDLETFRREIRKFHGKEITDIANNPQEYSDFVSAKARRTADVAQQYGIRRDSENARYFSY
ECHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
QLGNQCVGLMRTEGGFSMEEEFESKSWRDQFPGHQEITSTVDLQVAHPLVENAGDILLEH
ECCCHHEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
QLRRDGERPLLNWRAENPEAKARAAMMGFVEVDDCDMVLDPKQHPDKWTQTSAAEWRRKD
HHHCCCCCCEEEECCCCCHHHHHHHHHCCEEECCCCEEECCCCCCCHHHHHHHHHHHHCC
KPPLYLRKFEDAETAQCSTSCSYETYEDDFM
CCCEEEEECCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MYGRIDSSSDFHYTQSASKQMDAETQEFADTFARMHLDRSNGGSSSAARYTLDHEPPVVP
CCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEE
IDLETFRREIRKFHGKEITDIANNPQEYSDFVSAKARRTADVAQQYGIRRDSENARYFSY
ECHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
QLGNQCVGLMRTEGGFSMEEEFESKSWRDQFPGHQEITSTVDLQVAHPLVENAGDILLEH
ECCCHHEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
QLRRDGERPLLNWRAENPEAKARAAMMGFVEVDDCDMVLDPKQHPDKWTQTSAAEWRRKD
HHHCCCCCCEEEECCCCCHHHHHHHHHCCEEECCCCEEECCCCCCCHHHHHHHHHHHHCC
KPPLYLRKFEDAETAQCSTSCSYETYEDDFM
CCCEEEEECCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424