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The map label for this gene is ftsY [H]

Identifier: 239618078

GI number: 239618078

Start: 1838418

End: 1839335

Strand: Reverse

Name: ftsY [H]

Synonym: Kole_1710

Alternate gene names: 239618078

Gene position: 1839335-1838418 (Counterclockwise)

Preceding gene: 239618079

Following gene: 239618077

Centisome position: 79.9

GC content: 44.88

Gene sequence:

>918_bases
ATGGGATTCCTTTCTAAGATAAAAGAAGGTCTGAAAAAAACCCGTGATAGCGTATTCAGCAAAGTCAAGAACATTCTAAG
TCTCGAAAAACTTGATGCGGAAACCCTTGAGGAACTCGAAGAACTTTTAATTCTTTCAGACATGGGTGTTGAAACCGTTG
AAGAGGTAATAGAGCGTTTAAAAGAAAAGGTCAAAGAAGTGAAAGATCCAAATACAGCTTTAAAAAAAGTTCTCATAGAC
ATCCTGAAAGAAGAAGAAGAAGAAAAAAAGGAAGCACCCAAACCATACGTCCTGCTGATCGTGGGAGTTAACGGTACGGG
AAAAACAACCACAATCGGAAAGCTTTCAAGGATTTTCAAAGAACAGGGAAAACGTGTTGTTTTGGCGGCGGCAGATACCT
TCAGGGCAGCGGCCGTTGAACAGTTAAAGGTCTGGAGCGAACGAGTGGGAGCTGATTTCATTTCACAGGGCCAGGGAGCA
GACGCAGCTGCCGTGGCTTATGATGCCGTTATGCACGCAAAAAGCAAGGGAAAGGACATTGTCATAATCGATACCGCCGG
AAGGTTGCATACCCGACATAACCTCATGGAAGAGTTAAAGAAGGTTCATAGAACGATTGGAAGAGTCCTACCAGGTGCCC
CTCACGATGTTTGGCTGGTTATAGATGCGACAACGGGGCAAAACGGGCTGGTGCAGGCGAAAAAGTTCGCTGAAACAGTT
AACATCACGGGTATTGTTCTAACGAAACTCGATGGTACAGCCAAGGGCGGTATTGTTTTCGCAATAAAAAAAGAGCTTAA
AACACCCGTTAAATACATCGGTGTTGGCGAAGGTGTCGATGATTTAAAACCCTTCGATCCGGAAGAATTCGTCGATGCCC
TTCTGGCAACAGAAGAAGCCATGGATGCGGAGGTGTAA

Upstream 100 bases:

>100_bases
GTGGAAGTCTCTATCTCCGAAGGTTATGATTCAGTCCTTGAAACCGTGGAAAAACTGCTGAAAAAATACGATCCTGCAAA
GGTGGCGGAGGTAGATTAAC

Downstream 100 bases:

>100_bases
TCCATGGGATTCACCGTTAAAAGCAGCTACGCTCTCAGAGCGCTTTACGAGCTTGCACTTGCCGCTGAAAGCGGCAATCC
AAAACTATCGCTGGCAAAAA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MGFLSKIKEGLKKTRDSVFSKVKNILSLEKLDAETLEELEELLILSDMGVETVEEVIERLKEKVKEVKDPNTALKKVLID
ILKEEEEEKKEAPKPYVLLIVGVNGTGKTTTIGKLSRIFKEQGKRVVLAAADTFRAAAVEQLKVWSERVGADFISQGQGA
DAAAVAYDAVMHAKSKGKDIVIIDTAGRLHTRHNLMEELKKVHRTIGRVLPGAPHDVWLVIDATTGQNGLVQAKKFAETV
NITGIVLTKLDGTAKGGIVFAIKKELKTPVKYIGVGEGVDDLKPFDPEEFVDALLATEEAMDAEV

Sequences:

>Translated_305_residues
MGFLSKIKEGLKKTRDSVFSKVKNILSLEKLDAETLEELEELLILSDMGVETVEEVIERLKEKVKEVKDPNTALKKVLID
ILKEEEEEKKEAPKPYVLLIVGVNGTGKTTTIGKLSRIFKEQGKRVVLAAADTFRAAAVEQLKVWSERVGADFISQGQGA
DAAAVAYDAVMHAKSKGKDIVIIDTAGRLHTRHNLMEELKKVHRTIGRVLPGAPHDVWLVIDATTGQNGLVQAKKFAETV
NITGIVLTKLDGTAKGGIVFAIKKELKTPVKYIGVGEGVDDLKPFDPEEFVDALLATEEAMDAEV
>Mature_304_residues
GFLSKIKEGLKKTRDSVFSKVKNILSLEKLDAETLEELEELLILSDMGVETVEEVIERLKEKVKEVKDPNTALKKVLIDI
LKEEEEEKKEAPKPYVLLIVGVNGTGKTTTIGKLSRIFKEQGKRVVLAAADTFRAAAVEQLKVWSERVGADFISQGQGAD
AAAVAYDAVMHAKSKGKDIVIIDTAGRLHTRHNLMEELKKVHRTIGRVLPGAPHDVWLVIDATTGQNGLVQAKKFAETVN
ITGIVLTKLDGTAKGGIVFAIKKELKTPVKYIGVGEGVDDLKPFDPEEFVDALLATEEAMDAEV

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=203, Percent_Identity=35.9605911330049, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI226371618, Length=203, Percent_Identity=35.9605911330049, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI295424842, Length=329, Percent_Identity=30.6990881458967, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI23308697, Length=329, Percent_Identity=30.6990881458967, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=35.2941176470588, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI1789874, Length=304, Percent_Identity=48.6842105263158, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1788963, Length=274, Percent_Identity=36.1313868613139, Blast_Score=171, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17539958, Length=200, Percent_Identity=36, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI193206261, Length=325, Percent_Identity=32.6153846153846, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6325345, Length=216, Percent_Identity=36.1111111111111, Blast_Score=138, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6320498, Length=313, Percent_Identity=26.517571884984, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647949, Length=286, Percent_Identity=32.1678321678322, Blast_Score=137, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24641198, Length=318, Percent_Identity=29.559748427673, Blast_Score=115, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33380; Mature: 33249

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFLSKIKEGLKKTRDSVFSKVKNILSLEKLDAETLEELEELLILSDMGVETVEEVIERL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KEKVKEVKDPNTALKKVLIDILKEEEEEKKEAPKPYVLLIVGVNGTGKTTTIGKLSRIFK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHH
EQGKRVVLAAADTFRAAAVEQLKVWSERVGADFISQGQGADAAAVAYDAVMHAKSKGKDI
HCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEE
VIIDTAGRLHTRHNLMEELKKVHRTIGRVLPGAPHDVWLVIDATTGQNGLVQAKKFAETV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
NITGIVLTKLDGTAKGGIVFAIKKELKTPVKYIGVGEGVDDLKPFDPEEFVDALLATEEA
CCEEEEEEECCCCCCCCEEEEEEHHHHCCHHEEECCCCHHHCCCCCHHHHHHHHHHHHHH
MDAEV
HCCCC
>Mature Secondary Structure 
GFLSKIKEGLKKTRDSVFSKVKNILSLEKLDAETLEELEELLILSDMGVETVEEVIERL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KEKVKEVKDPNTALKKVLIDILKEEEEEKKEAPKPYVLLIVGVNGTGKTTTIGKLSRIFK
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHH
EQGKRVVLAAADTFRAAAVEQLKVWSERVGADFISQGQGADAAAVAYDAVMHAKSKGKDI
HCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEE
VIIDTAGRLHTRHNLMEELKKVHRTIGRVLPGAPHDVWLVIDATTGQNGLVQAKKFAETV
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH
NITGIVLTKLDGTAKGGIVFAIKKELKTPVKYIGVGEGVDDLKPFDPEEFVDALLATEEA
CCEEEEEEECCCCCCCCEEEEEEHHHHCCHHEEECCCCHHHCCCCCHHHHHHHHHHHHHH
MDAEV
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]