| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618070
Identifier: 239618070
GI number: 239618070
Start: 1830379
End: 1832049
Strand: Reverse
Name: 239618070
Synonym: Kole_1700
Alternate gene names: NA
Gene position: 1832049-1830379 (Counterclockwise)
Preceding gene: 239618073
Following gene: 239618066
Centisome position: 79.58
GC content: 38.36
Gene sequence:
>1671_bases ATGAATCGAAGATTTTTGACGGTTACAAAAATTCTTTTTTCCTTTGGCGGATTCGGCAGGCCATTTTTCACCTACGTGGT TGAAAAGGAACTTTCCACCCCGTCCAACGATGAGGACAGGGTATGGAGAAGTTTTTTTGTTGCCTTGAAACTTGAAGGAG AGAGAAAATACGAAGAAGCATTGGCGATGATCAACAAAGCATTAAAAAAATGTTTGGTTCCTTCCTTGCGATACGCCTTA CTGACTCGAAAATTGTCCCTTCTTCTAAAATCAGGAAGATACAAGGAAGGAAGACCGATCTATATATCGTTACGGAAAAA CCTCCATAAAATCACCCCTGAGATACGTTACACGCTGACGATAAATGCTTTGCTTTTATACTGTTCAAAAGTTGAAGGAC CTTATACTAGTTGTCTTGGAAAATTAAAGCTCAACAATATGGAAGAAAATGCTTTGAGTTTTACTCTGCTCAATGTGGGA AGAGAACTTGTGAAGAAAGGAAAAACTCGCGAAGGTATCAAGAAATTTATTGAGAGTTTCAAAATGGCTGAGAAATCCAA ACATCCCGCTGGAATGATTCTCGCTCTTAATGCCATTGCATGGTATTCCAGGGAAGAACACCCTGTACTTGGACTTAAAG TTGCAGAAAAAGCCGCCTATCTTGCTGGATACTTTACGGATAGACCGTGGAATTTTTACGTCCTACACACCCTTTTTACT CTGCTTAGCAAAACAAGAAAAAGATGTCTTGTTCCGCTGTCCCGAACAATTGTTGGTCTTATAACACGACTGCCGGAATG GGAAAAAGAAAGATCGAAACTGGTAATTGAAAAGGCCCGAAAGATTTATTCTCTGTTCTCTTCCACCGGTAATTCAAAAT ACGAAGTATCACATGAATTAAGGGAATATCTGGATAAATACATTAGAAATATCTCAAAAGTTTCCAGATTGACCGGGATC GATCGGAAAAATATTTCAAGGATAATTCACGGAAAAACGAGAACAATAAAAGGAGAAACTCTTAGAAAGATTATTGCCGG GCTGAATCTTCATGTTGATCCCATGTCAGCTCCCGGGCCGATAGTTAGCGAATGGGTGAAAATAAGAATAGACGAACAAA GCAGAATCTATCTTTCAAAACTCTATAACTTAAACCCATTAGAAAGAAAAAAAGAAGTGTTTACCGCTTACAGTTGCTTT GCTGGAAGAAGAGATTTATTTCGGAATTTAACAAGAAAAGGTTCCATAGATAGATTGTTTACACTACTGGATGATCCAGA AAATCTGGAAAAGGAGTTGGACTCAAAATTCATCTGGTCGTACTTCCTTTACGCTTGCAATACCCTTTCAGATTACGAGA AAGCAAGAAAAGCCTTGGCGATGTTATTCATTAATCATTTTCCACCAAAAAAGACAAAAAAATTCCTCAACAGTTATTTT TCCACAGACGAAACCACAAGAGAACTCGTAGATGAATTTATCAGGAATTATATCAGATACAACCGGAAGTGGGGTATAAG ACTGGAAAATCAGAGCTATTCTGAATTGGCAAAAAGGCTCGGTCTCAAGGCCCAGTCAATGGTTATCGCAATGTATTGCT TTGACAAAAGATCCCGGAGAAAGGTAGTAGAAAACTTCCTTGAAAATCTAACCACTAAAATCGACACTTAA
Upstream 100 bases:
>100_bases GCGAGAGACATTGATATACTTTTCTTTGAAAATAGGAAAATATTATAATGTGATAGATAACACCTCACTGTTGTCAAGAT TTAGTTCAGGAGCAAAATTC
Downstream 100 bases:
>100_bases AGAAAAATCGGGGAATTCTACCCCACCAATCCATAAAGAAGCCTGAGTTCATCAAGAAGAAGAATAGCGGTATACCCACC GATAGCTATAAACGGGCCAA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MNRRFLTVTKILFSFGGFGRPFFTYVVEKELSTPSNDEDRVWRSFFVALKLEGERKYEEALAMINKALKKCLVPSLRYAL LTRKLSLLLKSGRYKEGRPIYISLRKNLHKITPEIRYTLTINALLLYCSKVEGPYTSCLGKLKLNNMEENALSFTLLNVG RELVKKGKTREGIKKFIESFKMAEKSKHPAGMILALNAIAWYSREEHPVLGLKVAEKAAYLAGYFTDRPWNFYVLHTLFT LLSKTRKRCLVPLSRTIVGLITRLPEWEKERSKLVIEKARKIYSLFSSTGNSKYEVSHELREYLDKYIRNISKVSRLTGI DRKNISRIIHGKTRTIKGETLRKIIAGLNLHVDPMSAPGPIVSEWVKIRIDEQSRIYLSKLYNLNPLERKKEVFTAYSCF AGRRDLFRNLTRKGSIDRLFTLLDDPENLEKELDSKFIWSYFLYACNTLSDYEKARKALAMLFINHFPPKKTKKFLNSYF STDETTRELVDEFIRNYIRYNRKWGIRLENQSYSELAKRLGLKAQSMVIAMYCFDKRSRRKVVENFLENLTTKIDT
Sequences:
>Translated_556_residues MNRRFLTVTKILFSFGGFGRPFFTYVVEKELSTPSNDEDRVWRSFFVALKLEGERKYEEALAMINKALKKCLVPSLRYAL LTRKLSLLLKSGRYKEGRPIYISLRKNLHKITPEIRYTLTINALLLYCSKVEGPYTSCLGKLKLNNMEENALSFTLLNVG RELVKKGKTREGIKKFIESFKMAEKSKHPAGMILALNAIAWYSREEHPVLGLKVAEKAAYLAGYFTDRPWNFYVLHTLFT LLSKTRKRCLVPLSRTIVGLITRLPEWEKERSKLVIEKARKIYSLFSSTGNSKYEVSHELREYLDKYIRNISKVSRLTGI DRKNISRIIHGKTRTIKGETLRKIIAGLNLHVDPMSAPGPIVSEWVKIRIDEQSRIYLSKLYNLNPLERKKEVFTAYSCF AGRRDLFRNLTRKGSIDRLFTLLDDPENLEKELDSKFIWSYFLYACNTLSDYEKARKALAMLFINHFPPKKTKKFLNSYF STDETTRELVDEFIRNYIRYNRKWGIRLENQSYSELAKRLGLKAQSMVIAMYCFDKRSRRKVVENFLENLTTKIDT >Mature_556_residues MNRRFLTVTKILFSFGGFGRPFFTYVVEKELSTPSNDEDRVWRSFFVALKLEGERKYEEALAMINKALKKCLVPSLRYAL LTRKLSLLLKSGRYKEGRPIYISLRKNLHKITPEIRYTLTINALLLYCSKVEGPYTSCLGKLKLNNMEENALSFTLLNVG RELVKKGKTREGIKKFIESFKMAEKSKHPAGMILALNAIAWYSREEHPVLGLKVAEKAAYLAGYFTDRPWNFYVLHTLFT LLSKTRKRCLVPLSRTIVGLITRLPEWEKERSKLVIEKARKIYSLFSSTGNSKYEVSHELREYLDKYIRNISKVSRLTGI DRKNISRIIHGKTRTIKGETLRKIIAGLNLHVDPMSAPGPIVSEWVKIRIDEQSRIYLSKLYNLNPLERKKEVFTAYSCF AGRRDLFRNLTRKGSIDRLFTLLDDPENLEKELDSKFIWSYFLYACNTLSDYEKARKALAMLFINHFPPKKTKKFLNSYF STDETTRELVDEFIRNYIRYNRKWGIRLENQSYSELAKRLGLKAQSMVIAMYCFDKRSRRKVVENFLENLTTKIDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65024; Mature: 65024
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRFLTVTKILFSFGGFGRPFFTYVVEKELSTPSNDEDRVWRSFFVALKLEGERKYEEA CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHHH LAMINKALKKCLVPSLRYALLTRKLSLLLKSGRYKEGRPIYISLRKNLHKITPEIRYTLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCEEEEE INALLLYCSKVEGPYTSCLGKLKLNNMEENALSFTLLNVGRELVKKGKTREGIKKFIESF HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KMAEKSKHPAGMILALNAIAWYSREEHPVLGLKVAEKAAYLAGYFTDRPWNFYVLHTLFT HHHHHCCCCCCEEHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LLSKTRKRCLVPLSRTIVGLITRLPEWEKERSKLVIEKARKIYSLFSSTGNSKYEVSHEL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH REYLDKYIRNISKVSRLTGIDRKNISRIIHGKTRTIKGETLRKIIAGLNLHVDPMSAPGP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECHHHHHHHHHCCCCEECCCCCCCH IVSEWVKIRIDEQSRIYLSKLYNLNPLERKKEVFTAYSCFAGRRDLFRNLTRKGSIDRLF HHHHHHEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TLLDDPENLEKELDSKFIWSYFLYACNTLSDYEKARKALAMLFINHFPPKKTKKFLNSYF HHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH STDETTRELVDEFIRNYIRYNRKWGIRLENQSYSELAKRLGLKAQSMVIAMYCFDKRSRR CCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHH KVVENFLENLTTKIDT HHHHHHHHHHHHHCCC >Mature Secondary Structure MNRRFLTVTKILFSFGGFGRPFFTYVVEKELSTPSNDEDRVWRSFFVALKLEGERKYEEA CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCHHHHHH LAMINKALKKCLVPSLRYALLTRKLSLLLKSGRYKEGRPIYISLRKNLHKITPEIRYTLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCCCCEEEEE INALLLYCSKVEGPYTSCLGKLKLNNMEENALSFTLLNVGRELVKKGKTREGIKKFIESF HHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KMAEKSKHPAGMILALNAIAWYSREEHPVLGLKVAEKAAYLAGYFTDRPWNFYVLHTLFT HHHHHCCCCCCEEHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LLSKTRKRCLVPLSRTIVGLITRLPEWEKERSKLVIEKARKIYSLFSSTGNSKYEVSHEL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH REYLDKYIRNISKVSRLTGIDRKNISRIIHGKTRTIKGETLRKIIAGLNLHVDPMSAPGP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEECHHHHHHHHHCCCCEECCCCCCCH IVSEWVKIRIDEQSRIYLSKLYNLNPLERKKEVFTAYSCFAGRRDLFRNLTRKGSIDRLF HHHHHHEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH TLLDDPENLEKELDSKFIWSYFLYACNTLSDYEKARKALAMLFINHFPPKKTKKFLNSYF HHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH STDETTRELVDEFIRNYIRYNRKWGIRLENQSYSELAKRLGLKAQSMVIAMYCFDKRSRR CCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHH KVVENFLENLTTKIDT HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA