Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
---|---|
Accession | NC_012785 |
Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239618062
Identifier: 239618062
GI number: 239618062
Start: 1822157
End: 1822528
Strand: Reverse
Name: 239618062
Synonym: Kole_1692
Alternate gene names: NA
Gene position: 1822528-1822157 (Counterclockwise)
Preceding gene: 239618063
Following gene: 239618061
Centisome position: 79.17
GC content: 41.67
Gene sequence:
>372_bases ATGAAATACAGGCTATTTAGGCCTTTAGATTTGCTGGTGATAATTTTTCTCGTGGTTACCATATTCGCTTTTTCAGGAAA ATCTCCTGGCCTGGCTCAAAATATTGCTGAGATTTACCACGATGGAATGCTTTACAGGACTTTAGATCTCACAAAAGAGG CAACCTACAATGTCCTTGACCACATGGTCGTAGAAGTTAGTGAAGGATCGGTGCGAGTGATTGAATCAGATTGTCCCGAG AAACTGTGCGTTAAAAGCGGCTGGATTTCGCATCCTGATATTCCCATCGTCTGTCTCCCAAACAAAATTACCATCATTAT TCCTTCTAACGGTAAAAAGGGCGACACAGAAATGGATGCGATAACAAGATGA
Upstream 100 bases:
>100_bases CCGGGATAACCTTTTTCCCCAGATATGGCGCTCTTGTCATGCTTGTTATGGAAGATCTGAGTACGTACAAATCACCGGGA TTTGAGGTGTATCAGAAAAA
Downstream 100 bases:
>100_bases ATGCAAGAAAAATTGCTTCTTTCTCACTTTTAATAGCCCTGGGATCCGCTATATACGTTGTTGAAAGCTTTATACCTTTT TTATTGCCAATCCCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKYRLFRPLDLLVIIFLVVTIFAFSGKSPGLAQNIAEIYHDGMLYRTLDLTKEATYNVLDHMVVEVSEGSVRVIESDCPE KLCVKSGWISHPDIPIVCLPNKITIIIPSNGKKGDTEMDAITR
Sequences:
>Translated_123_residues MKYRLFRPLDLLVIIFLVVTIFAFSGKSPGLAQNIAEIYHDGMLYRTLDLTKEATYNVLDHMVVEVSEGSVRVIESDCPE KLCVKSGWISHPDIPIVCLPNKITIIIPSNGKKGDTEMDAITR >Mature_123_residues MKYRLFRPLDLLVIIFLVVTIFAFSGKSPGLAQNIAEIYHDGMLYRTLDLTKEATYNVLDHMVVEVSEGSVRVIESDCPE KLCVKSGWISHPDIPIVCLPNKITIIIPSNGKKGDTEMDAITR
Specific function: Unknown
COG id: COG5341
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13778; Mature: 13778
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRLFRPLDLLVIIFLVVTIFAFSGKSPGLAQNIAEIYHDGMLYRTLDLTKEATYNVLD CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHH HMVVEVSEGSVRVIESDCPEKLCVKSGWISHPDIPIVCLPNKITIIIPSNGKKGDTEMDA HHHEEECCCCEEEECCCCCHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHH ITR CCC >Mature Secondary Structure MKYRLFRPLDLLVIIFLVVTIFAFSGKSPGLAQNIAEIYHDGMLYRTLDLTKEATYNVLD CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHHHH HMVVEVSEGSVRVIESDCPEKLCVKSGWISHPDIPIVCLPNKITIIIPSNGKKGDTEMDA HHHEEECCCCEEEECCCCCHHHHHHCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCHHH ITR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA