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The map label for this gene is ymaB [H]

Identifier: 239617962

GI number: 239617962

Start: 1704823

End: 1705404

Strand: Reverse

Name: ymaB [H]

Synonym: Kole_1590

Alternate gene names: 239617962

Gene position: 1705404-1704823 (Counterclockwise)

Preceding gene: 239617963

Following gene: 239617961

Centisome position: 74.08

GC content: 41.58

Gene sequence:

>582_bases
GTGGAAGAAAACGTTCTGGTAGTAAAAACACAGGCTCTTTCAGACATTCTCACGGAAGAAGGTGTACTTAAGGTAAGCGA
AGAGATAATTGAGTCTAAGTTGAGAGAATTCGGCGAGTTTTTACCTCGGAATGCGGCAGAGTTCGATGAAAATTACCGGC
AGATAATTCCCTATGTCGTCATGATGTCGGAAGGTAAGGTGCTGTTGTTACGACGTACAACCAGACAGGGAGAAAAAAGG
CTTCACAACAAATACTCTCTTGGTGTTGGCGGACATATAAACGATACCGATGCTTCTTCCGATCTATGGGAAACCTTTAA
AAAAGGGATGGAACGCGAAATAAATGAAGAAGTAGAAGTCGAGATAAAAGAATTGAAGTACATAGGATTGATAAATGAAA
CCTCAACGGAAGTCAGCAGGGTACACCTGGGGATTGCCTATGTAGCAGAGGTAGAGTTTTTCGGTCTCAGAGAAGAGGAT
ATGTTTGAAATCCAATGGATTCATCCTGATGAACTCTGTAAAAAAGATTGGGGACTTGAAGGTTGGTCGAAACTGGTGTT
GAAAGAAATAACGGGTTGTTAA

Upstream 100 bases:

>100_bases
TCTTGAGGGCTTACCAGAAAGTGAGGAAGAGGCTTTTGTCAGAAAGCTTCTAAAAGAACCCCCGGAAATGAGGGGAAAAC
GCTAATCGAGGAGGTAAACA

Downstream 100 bases:

>100_bases
AAGCTTACGCCAAATTAAATCTTTACCTCGCTGTCGGGCCGAAGCGTGATGACAGTTTTCACGAGCTTCTCACGCTTTTT
CAAACGATATCACTTTACGA

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MEENVLVVKTQALSDILTEEGVLKVSEEIIESKLREFGEFLPRNAAEFDENYRQIIPYVVMMSEGKVLLLRRTTRQGEKR
LHNKYSLGVGGHINDTDASSDLWETFKKGMEREINEEVEVEIKELKYIGLINETSTEVSRVHLGIAYVAEVEFFGLREED
MFEIQWIHPDELCKKDWGLEGWSKLVLKEITGC

Sequences:

>Translated_193_residues
MEENVLVVKTQALSDILTEEGVLKVSEEIIESKLREFGEFLPRNAAEFDENYRQIIPYVVMMSEGKVLLLRRTTRQGEKR
LHNKYSLGVGGHINDTDASSDLWETFKKGMEREINEEVEVEIKELKYIGLINETSTEVSRVHLGIAYVAEVEFFGLREED
MFEIQWIHPDELCKKDWGLEGWSKLVLKEITGC
>Mature_193_residues
MEENVLVVKTQALSDILTEEGVLKVSEEIIESKLREFGEFLPRNAAEFDENYRQIIPYVVMMSEGKVLLLRRTTRQGEKR
LHNKYSLGVGGHINDTDASSDLWETFKKGMEREINEEVEVEIKELKYIGLINETSTEVSRVHLGIAYVAEVEFFGLREED
MFEIQWIHPDELCKKDWGLEGWSKLVLKEITGC

Specific function: Unknown

COG id: COG4112

COG function: function code R; Predicted phosphoesterase (MutT family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22342; Mature: 22342

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENVLVVKTQALSDILTEEGVLKVSEEIIESKLREFGEFLPRNAAEFDENYRQIIPYVV
CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE
MMSEGKVLLLRRTTRQGEKRLHNKYSLGVGGHINDTDASSDLWETFKKGMEREINEEVEV
EECCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
EIKELKYIGLINETSTEVSRVHLGIAYVAEVEFFGLREEDMFEIQWIHPDELCKKDWGLE
HHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCC
GWSKLVLKEITGC
HHHHHHHHHHCCC
>Mature Secondary Structure
MEENVLVVKTQALSDILTEEGVLKVSEEIIESKLREFGEFLPRNAAEFDENYRQIIPYVV
CCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHE
MMSEGKVLLLRRTTRQGEKRLHNKYSLGVGGHINDTDASSDLWETFKKGMEREINEEVEV
EECCCCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH
EIKELKYIGLINETSTEVSRVHLGIAYVAEVEFFGLREEDMFEIQWIHPDELCKKDWGLE
HHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCCCC
GWSKLVLKEITGC
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8407798 [H]