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The map label for this gene is rimP [H]

Identifier: 239617902

GI number: 239617902

Start: 1642173

End: 1642676

Strand: Reverse

Name: rimP [H]

Synonym: Kole_1530

Alternate gene names: 239617902

Gene position: 1642676-1642173 (Counterclockwise)

Preceding gene: 239617913

Following gene: 239617901

Centisome position: 71.35

GC content: 41.47

Gene sequence:

>504_bases
GTGCCCTCTATTTTTATTAGTATGGAAGTGGTGGATGGGATGTATGAGCTAACGGAAAAATTGAGGAAGCTAGCTGAAGA
AGTGGCAGAAGAGTTGGGATACGAGATATACAAACTGACCTTTGGTAAGGGAAGAAGAAGAGCGGTTCTGACAGTTGCGA
TAGATAAAGAAGACGGTTATATTTCGATCTCAGATTGCGAAAATTTCTCTCGCGCATTCGAAAAGAAGCTTGACGAAACC
GAAATAATAAGCTCTTCTTACAATCTGGTGATTGAATCACCAGGTGCTGAAAGGGAACTCAGAAAACCCGGGGATTTCAT
GAGATTCACCGGTAAATCCGTAAAGATCGTGTTAAAAGAACCTCTGGAAAACCGTTCTGTGCTTGTAGGCCAGCTAATTA
ATGCCAATGAAGACCTCGTGACCATAATCGAGGCTGACAGCAACAGGACATTTGAAGTTGAATACAGAATGATAAAGAAA
GCAAATTTGAGACTTGAACGGTAA

Upstream 100 bases:

>100_bases
CTAACAACTATCTATAAATTCAGATACATTTCGCTTGACTGATAACCAGGAAATGTATATAATTAAATTAGTGAATACTC
CCTAAGGGAGAGGGCTGTTT

Downstream 100 bases:

>100_bases
TCTTGGGAGGTGCAGAAGATGAATCTCAATCTTCTGGAAGCGCTGGAACAACTTGAAGAAGAAAAAAATATTAAAAAAGA
CGAAGTTATCAGTATTCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPSIFISMEVVDGMYELTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGYISISDCENFSRAFEKKLDET
EIISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKEPLENRSVLVGQLINANEDLVTIIEADSNRTFEVEYRMIKK
ANLRLER

Sequences:

>Translated_167_residues
MPSIFISMEVVDGMYELTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGYISISDCENFSRAFEKKLDET
EIISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKEPLENRSVLVGQLINANEDLVTIIEADSNRTFEVEYRMIKK
ANLRLER
>Mature_166_residues
PSIFISMEVVDGMYELTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGYISISDCENFSRAFEKKLDETE
IISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKEPLENRSVLVGQLINANEDLVTIIEADSNRTFEVEYRMIKKA
NLRLER

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=150, Percent_Identity=32, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 19179; Mature: 19048

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSIFISMEVVDGMYELTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGY
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCE
ISISDCENFSRAFEKKLDETEIISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKE
EEHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHCCCCCCEEECCCEEEEEEEC
PLENRSVLVGQLINANEDLVTIIEADSNRTFEVEYRMIKKANLRLER
CCCCCCEEEEHCCCCCCCEEEEEECCCCCEEEEHEEEEECCCCEECC
>Mature Secondary Structure 
PSIFISMEVVDGMYELTEKLRKLAEEVAEELGYEIYKLTFGKGRRRAVLTVAIDKEDGY
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEECCCCE
ISISDCENFSRAFEKKLDETEIISSSYNLVIESPGAERELRKPGDFMRFTGKSVKIVLKE
EEHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCHHCCCCCCEEECCCEEEEEEEC
PLENRSVLVGQLINANEDLVTIIEADSNRTFEVEYRMIKKANLRLER
CCCCCCEEEEHCCCCCCCEEEEEECCCCCEEEEHEEEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA