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The map label for this gene is ugpB [C]

Identifier: 239617266

GI number: 239617266

Start: 920776

End: 921996

Strand: Reverse

Name: ugpB [C]

Synonym: Kole_0875

Alternate gene names: 239617266

Gene position: 921996-920776 (Counterclockwise)

Preceding gene: 239617267

Following gene: 239617265

Centisome position: 40.05

GC content: 43.9

Gene sequence:

>1221_bases
ATGAGGCGTGTTTTGCTGGTAACCGTATTGCTTATCAGCTTGCTTGCGGTTGTTGCCGAAGGTAAAGTTGTACTCAAATT
CTGGAATTTCTGGTCTGACAAATGGATGGGTCCGGTGATCGAAGAATTCATGAAGGAAAACCCGGATATCGAGGTACAGA
TGGAAAGACTGACGTGGTCCGATGGATTCAACAAAATAGTCACTGCTTTTGCTGCTGGCGATACACCAGATGTGCTGGAG
CTCGGTTCAACATGGGTCGCTCAATTTGCGGCTGACGGTGCGCTTCTTGAAGTTGATGTCAGCGATCTGCTGGATAAGTA
CAACATGTGGGATCCTGTAATCTACAAAGGTAAATATTACGGTTATCCATGGGTTGTTTCTACCAGAATTCTTTTCTACA
ACAAAGAACTCTTTAGAAAAGCTGGACTCGATCCTGAAATAGCACCGAGAACATGGGACGAGCTTCTGGATGCCGCGAAA
AAAATCAACGCATTAGGTGATGATATCTTTGGATTTGGAATCAAAACAGGACAGTACACAACATGGCAAACATTCCTGCC
CTTTGCATGGTCAAACGGCGGAAGTGTGTTGTCAGAAGACTGGAAGAGCGCTGCTGTAAACTCTCCTGAATTTGTTGAAG
CGCTGAGTTTCGTTCAAAAACTCACAAAATACTCCATGATAGACTCGAACCTCAACGTAAGACAGGCTTTCATGCAAGGA
AAAGTAGGTATCATCATGGACGATGTTGGAAGAATCAAGTCATTCGCGAAAGATGCTCCTGAACTAGATTTCGGTTATGC
TGTTTTTGTTAGACCGGATAAGTTGTGGTCAAAACCAACTCAGTTTGGTGGTGCCGAGGTTATTGTTATCCCAAGAAACA
CCAAGTATCCAAAGGAAGCTGAAAAACTTGCCAGGTTCATAGTTGAAAAAAGATCCGCAATGGCTATTTCCTCAAGAATA
CCGACATTGCTTCCGGCTGACAAAAGCGTTAAAGACGACGAGTTCTTTAAGAACCAGCCCGGTTTCTTTGTTATCATGAA
CCAACTCCAGTTCACAAAGACACCCCCTGCACATCCAAAGTGGGTTGAGATCCAGGAAATTCTCACCCAGTACATAACCG
AGGTTTACAACGGAACAATAGATCCGCAGTCCGCAATGGATATGGCAGCGGAAGAAATAAACGTAATTCTTGAAGAATTT
GAAGAAGAGTACGGCGAATAA

Upstream 100 bases:

>100_bases
ATGATTGGAATGAATATCTCGCTATTAGATTGTTAGATTATTTGATTGACAACACCCCACTTAAAGGCGAGTGCATTTTA
ACAAAGGGAGGGATTTAGTC

Downstream 100 bases:

>100_bases
TAGCGATAACAAATAATAGAAAATGGGGTGGGGCTTCCCACCTCACCCCTTTTTTTGAGGTGGTATCCACATGGCAAGTA
AAAGACTTAGAAATTCTCTC

Product: extracellular solute-binding protein family 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MRRVLLVTVLLISLLAVVAEGKVVLKFWNFWSDKWMGPVIEEFMKENPDIEVQMERLTWSDGFNKIVTAFAAGDTPDVLE
LGSTWVAQFAADGALLEVDVSDLLDKYNMWDPVIYKGKYYGYPWVVSTRILFYNKELFRKAGLDPEIAPRTWDELLDAAK
KINALGDDIFGFGIKTGQYTTWQTFLPFAWSNGGSVLSEDWKSAAVNSPEFVEALSFVQKLTKYSMIDSNLNVRQAFMQG
KVGIIMDDVGRIKSFAKDAPELDFGYAVFVRPDKLWSKPTQFGGAEVIVIPRNTKYPKEAEKLARFIVEKRSAMAISSRI
PTLLPADKSVKDDEFFKNQPGFFVIMNQLQFTKTPPAHPKWVEIQEILTQYITEVYNGTIDPQSAMDMAAEEINVILEEF
EEEYGE

Sequences:

>Translated_406_residues
MRRVLLVTVLLISLLAVVAEGKVVLKFWNFWSDKWMGPVIEEFMKENPDIEVQMERLTWSDGFNKIVTAFAAGDTPDVLE
LGSTWVAQFAADGALLEVDVSDLLDKYNMWDPVIYKGKYYGYPWVVSTRILFYNKELFRKAGLDPEIAPRTWDELLDAAK
KINALGDDIFGFGIKTGQYTTWQTFLPFAWSNGGSVLSEDWKSAAVNSPEFVEALSFVQKLTKYSMIDSNLNVRQAFMQG
KVGIIMDDVGRIKSFAKDAPELDFGYAVFVRPDKLWSKPTQFGGAEVIVIPRNTKYPKEAEKLARFIVEKRSAMAISSRI
PTLLPADKSVKDDEFFKNQPGFFVIMNQLQFTKTPPAHPKWVEIQEILTQYITEVYNGTIDPQSAMDMAAEEINVILEEF
EEEYGE
>Mature_406_residues
MRRVLLVTVLLISLLAVVAEGKVVLKFWNFWSDKWMGPVIEEFMKENPDIEVQMERLTWSDGFNKIVTAFAAGDTPDVLE
LGSTWVAQFAADGALLEVDVSDLLDKYNMWDPVIYKGKYYGYPWVVSTRILFYNKELFRKAGLDPEIAPRTWDELLDAAK
KINALGDDIFGFGIKTGQYTTWQTFLPFAWSNGGSVLSEDWKSAAVNSPEFVEALSFVQKLTKYSMIDSNLNVRQAFMQG
KVGIIMDDVGRIKSFAKDAPELDFGYAVFVRPDKLWSKPTQFGGAEVIVIPRNTKYPKEAEKLARFIVEKRSAMAISSRI
PTLLPADKSVKDDEFFKNQPGFFVIMNQLQFTKTPPAHPKWVEIQEILTQYITEVYNGTIDPQSAMDMAAEEINVILEEF
EEEYGE

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=432, Percent_Identity=24.3055555555556, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1787569, Length=321, Percent_Identity=26.1682242990654, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46170; Mature: 46170

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLLVTVLLISLLAVVAEGKVVLKFWNFWSDKWMGPVIEEFMKENPDIEVQMERLTWS
CCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCC
DGFNKIVTAFAAGDTPDVLELGSTWVAQFAADGALLEVDVSDLLDKYNMWDPVIYKGKYY
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEECCCCC
GYPWVVSTRILFYNKELFRKAGLDPEIAPRTWDELLDAAKKINALGDDIFGFGIKTGQYT
CCCHHHHHEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCE
TWQTFLPFAWSNGGSVLSEDWKSAAVNSPEFVEALSFVQKLTKYSMIDSNLNVRQAFMQG
EHHHCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
KVGIIMDDVGRIKSFAKDAPELDFGYAVFVRPDKLWSKPTQFGGAEVIVIPRNTKYPKEA
CCCEEEHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCCCCCEEEEEECCCCCCCHHH
EKLARFIVEKRSAMAISSRIPTLLPADKSVKDDEFFKNQPGFFVIMNQLQFTKTPPAHPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEEECEEECCCCCCCCC
WVEIQEILTQYITEVYNGTIDPQSAMDMAAEEINVILEEFEEEYGE
EEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRRVLLVTVLLISLLAVVAEGKVVLKFWNFWSDKWMGPVIEEFMKENPDIEVQMERLTWS
CCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECCC
DGFNKIVTAFAAGDTPDVLELGSTWVAQFAADGALLEVDVSDLLDKYNMWDPVIYKGKYY
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCEEECCCCC
GYPWVVSTRILFYNKELFRKAGLDPEIAPRTWDELLDAAKKINALGDDIFGFGIKTGQYT
CCCHHHHHEEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCE
TWQTFLPFAWSNGGSVLSEDWKSAAVNSPEFVEALSFVQKLTKYSMIDSNLNVRQAFMQG
EHHHCCCEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
KVGIIMDDVGRIKSFAKDAPELDFGYAVFVRPDKLWSKPTQFGGAEVIVIPRNTKYPKEA
CCCEEEHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCCCCCEEEEEECCCCCCCHHH
EKLARFIVEKRSAMAISSRIPTLLPADKSVKDDEFFKNQPGFFVIMNQLQFTKTPPAHPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCEEEEEECEEECCCCCCCCC
WVEIQEILTQYITEVYNGTIDPQSAMDMAAEEINVILEEFEEEYGE
EEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA